Orthogroup:group_2554


Homologs in group_2554

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_02600 FBDBKF_02600 Morganella morganii S1 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein)
EHELCC_03070 EHELCC_03070 Morganella morganii S2 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein)
NLDBIP_00390 NLDBIP_00390 Morganella morganii S4 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein)
LHKJJB_01645 LHKJJB_01645 Morganella morganii S3 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein)
HKOGLL_01685 HKOGLL_01685 Morganella morganii S5 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein)
F4V73_RS05040 F4V73_RS05040 Morganella psychrotolerans - efflux RND transporter periplasmic adaptor subunit

Distribution of group_2554 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2554 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2554

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2554.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 acrA 5
2 - 1

Product

# Product Occurence
1 Multidrug efflux pump subunit AcrA (membrane-fusion protein) 5
2 efflux RND transporter periplasmic adaptor subunit 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0845 6 MV Cell wall/membrane/envelope biogenesis (M)
Defense mechanisms (V)		 Multidrug efflux pump subunit AcrA (membrane-fusion protein)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF16576 6 Barrel-sandwich domain of CusB or HlyD membrane-fusion

Annotations of the 49 SwissProt hits

Annotation Number of occurrences
Cation efflux system protein CzcB 1
Cobalt-zinc-cadmium resistance protein CzcB 1
Membrane fusion protein MtrC 1
Multidrug export protein EmrA 1
Multidrug resistance protein MdtA 41
Nickel-cobalt-cadmium resistance protein NccB 1
Putative multidrug resistance protein MdtA 1
Pyoverdine export membrane fusion protein PvdR 2

Protein length

Min length 359
Max length 362
Mean length (sd) 361.5 (1.2)
Median length 362.0

Protein length distribution