PF06812

Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF06812
Protein list: lists the 19 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF06812
Description ImpA, N-terminal, type VI secretion system

Occurence in the database

PF06812 is associated with 19 different proteins
The 19 proteins are classified into 5 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_626 FBDBKF_01350 262484 263941 1 tssA type VI secretion system protein TssA Morganella morganii S1
1 group_166 FBDBKF_01360 267489 268844 1 impA ImpA N-terminal domain-containing protein Morganella morganii S1
2 group_166 EHELCC_00185 40024 41379 -1 impA ImpA N-terminal domain-containing protein Morganella morganii S2
3 group_626 EHELCC_00195 44927 46384 -1 tssA type VI secretion system protein TssA Morganella morganii S2
4 group_626 NLDBIP_03265 633752 635209 1 tssA type VI secretion system protein TssA Morganella morganii S4
5 group_166 NLDBIP_03275 638757 640112 1 impA ImpA N-terminal domain-containing protein Morganella morganii S4
6 group_626 LHKJJB_04780 240993 242450 1 tssA type VI secretion system protein TssA Morganella morganii S3
7 group_166 LHKJJB_04790 245998 247353 1 impA ImpA N-terminal domain-containing protein Morganella morganii S3
8 group_166 HKOGLL_02255 40229 41584 -1 impA ImpA N-terminal domain-containing protein Morganella morganii S5
9 group_626 HKOGLL_02265 45132 46589 -1 tssA type VI secretion system protein TssA Morganella morganii S5
10 group_4532 F4V73_RS00100 24760 25746 -1 type VI secretion system ImpA family N-terminal domain-containing protein Morganella psychrotolerans
11 group_166 F4V73_RS02310 487204 488550 -1 VasL domain-containing protein Morganella psychrotolerans
12 group_626 F4V73_RS02320 492131 493591 -1 tssA type VI secretion system protein TssA Morganella psychrotolerans
13 group_3986 F4V73_RS07035 1460550 1461836 -1 type VI secretion system ImpA family N-terminal domain-containing protein Morganella psychrotolerans
14 group_4679 F4V73_RS09405 1983125 1984249 1 type VI secretion system ImpA family N-terminal domain-containing protein Morganella psychrotolerans
15 group_166 F4V73_RS16725 167536 168903 -1 VasL domain-containing protein Morganella psychrotolerans
16 group_166 F4V73_RS16750 172757 174364 -1 tssA type VI secretion system protein TssA Morganella psychrotolerans
17 group_166 PMI_RS03615 810082 811425 -1 VasL domain-containing protein Proteus mirabilis HI4320
18 group_626 PMI_RS03625 815026 816489 -1 tssA type VI secretion system protein TssA Proteus mirabilis HI4320