Orthogroup:group_148


Homologs in group_148

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10 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01360 FBDBKF_01360 Morganella morganii S1 impA ImpA N-terminal domain-containing protein
EHELCC_00185 EHELCC_00185 Morganella morganii S2 impA ImpA N-terminal domain-containing protein
NLDBIP_03275 NLDBIP_03275 Morganella morganii S4 impA ImpA N-terminal domain-containing protein
LHKJJB_04790 LHKJJB_04790 Morganella morganii S3 impA ImpA N-terminal domain-containing protein
HKOGLL_02255 HKOGLL_02255 Morganella morganii S5 impA ImpA N-terminal domain-containing protein
F4V73_RS00100 F4V73_RS00100 Morganella psychrotolerans - type VI secretion system ImpA family N-terminal domain-containing protein
F4V73_RS02310 F4V73_RS02310 Morganella psychrotolerans - VasL domain-containing protein
F4V73_RS16725 F4V73_RS16725 Morganella psychrotolerans - VasL domain-containing protein
F4V73_RS16750 F4V73_RS16750 Morganella psychrotolerans tssA type VI secretion system protein TssA
PMI_RS03615 PMI_RS03615 Proteus mirabilis HI4320 - VasL domain-containing protein

Distribution of group_148 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_148 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_148

Orthogroup content: 10 members

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This page summarizes the annotation of all members of the orthologous group group_148.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 impA 5
2 - 4
3 tssA 1

Product

# Product Occurence
1 ImpA N-terminal domain-containing protein 5
2 type VI secretion system ImpA family N-terminal domain-containing protein 1
3 VasL domain-containing protein 3
4 type VI secretion system protein TssA 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3515 10 U Intracellular trafficking, secretion, and vesicular transport (U) Type VI protein secretion system component TssA1/VasJ/EvfE, contains ImpA_N domain

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K11902 1 type VI secretion system protein ImpA Biofilm formation - Pseudomonas aeruginosa -
K11910 1 type VI secretion system protein VasJ - -
K11911 8 type VI secretion system protein VasL - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF06812 10 ImpA, N-terminal, type VI secretion system
PF12486 8 Type VI secretion system, EvfB, or VasL
PF16989 1 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ

Annotations of the 1 SwissProt hits

Annotation Number of occurrences
Type VI secretion system component TssA1 1

Protein length

Min length 328
Max length 535
Mean length (sd) 446.8 (49.5)
Median length 451.0

Protein length distribution