PF03222


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF03222, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 38 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF03222
Description Tryptophan/tyrosine permease family

Occurence in the database

PF03222 is associated with 38 different proteins (see tab "Protein list" and "Profile")
The 38 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_438 FBDBKF_00415 62032 63237 1 tyrP tyrosine transporter TyrP Morganella morganii S1
1 group_18 FBDBKF_06965 57204 58523 -1 sdaC Amino acid permease Morganella morganii S1
2 group_18 FBDBKF_06970 59476 60795 -1 sdaC Amino acid permease Morganella morganii S1
3 group_19 FBDBKF_07880 104662 105906 1 mtr tryptophan permease Morganella morganii S1
4 group_19 FBDBKF_11130 50714 51982 -1 sdaC Amino acid permease Morganella morganii S1
5 group_19 FBDBKF_14845 70429 71676 1 mtr tryptophan permease Morganella morganii S1
6 group_438 EHELCC_01130 245631 246836 -1 tyrP tyrosine transporter TyrP Morganella morganii S2
7 group_18 EHELCC_04000 125391 126710 1 sdaC Amino acid permease Morganella morganii S2
8 group_18 EHELCC_04005 127663 128982 1 sdaC Amino acid permease Morganella morganii S2
9 group_19 EHELCC_05095 7486 8754 1 sdaC Amino acid permease Morganella morganii S2
10 group_19 EHELCC_13710 78856 80100 1 mtr tryptophan permease Morganella morganii S2
11 group_19 EHELCC_15650 100505 101752 1 mtr tryptophan permease Morganella morganii S2
12 group_438 NLDBIP_02330 433300 434505 1 tyrP tyrosine transporter TyrP Morganella morganii S4
13 group_18 NLDBIP_04000 125187 126506 1 sdaC Amino acid permease Morganella morganii S4
14 group_18 NLDBIP_04005 127459 128778 1 sdaC Amino acid permease Morganella morganii S4
15 group_19 NLDBIP_05415 48559 49827 1 sdaC Amino acid permease Morganella morganii S4
16 group_19 NLDBIP_14155 99731 100975 1 mtr tryptophan permease Morganella morganii S4
17 group_19 NLDBIP_16180 100505 101752 1 mtr tryptophan permease Morganella morganii S4
18 group_19 LHKJJB_02295 26083 27351 1 sdaC Amino acid permease Morganella morganii S3
19 group_438 LHKJJB_03845 40541 41746 1 tyrP tyrosine transporter TyrP Morganella morganii S3
20 group_19 LHKJJB_08695 58774 60018 -1 mtr tryptophan permease Morganella morganii S3
21 group_18 LHKJJB_09830 125301 126620 1 sdaC Amino acid permease Morganella morganii S3
22 group_18 LHKJJB_09835 127573 128892 1 sdaC Amino acid permease Morganella morganii S3
23 group_19 LHKJJB_15660 14934 16181 -1 mtr tryptophan permease Morganella morganii S3
24 group_438 HKOGLL_03200 245836 247041 -1 tyrP tyrosine transporter TyrP Morganella morganii S5
25 group_19 HKOGLL_08245 58774 60018 -1 mtr tryptophan permease Morganella morganii S5
26 group_18 HKOGLL_09140 62160 63479 -1 sdaC Amino acid permease Morganella morganii S5
27 group_18 HKOGLL_09145 64432 65751 -1 sdaC Amino acid permease Morganella morganii S5
28 group_19 HKOGLL_14780 14146 15393 -1 mtr tryptophan permease Morganella morganii S5
29 group_19 HKOGLL_15675 49523 50791 1 sdaC Amino acid permease Morganella morganii S5
30 group_18 F4V73_RS01160 244299 245618 -1 HAAAP family serine/threonine permease Morganella psychrotolerans
31 group_438 F4V73_RS06395 1334567 1335712 1 tyrP tyrosine transporter TyrP Morganella psychrotolerans
32 group_19 F4V73_RS07645 1599899 1601146 1 mtr tryptophan permease Morganella psychrotolerans
33 group_19 F4V73_RS08145 1692461 1693723 1 aromatic amino acid transporter Morganella psychrotolerans
34 group_19 F4V73_RS13140 244486 245730 -1 mtr tryptophan permease Morganella psychrotolerans
35 group_18 PMI_RS03305 731056 732384 -1 HAAAP family serine/threonine permease Proteus mirabilis HI4320
36 group_19 PMI_RS04105 917328 918569 -1 mtr tryptophan permease Proteus mirabilis HI4320
37 group_438 PMI_RS08530 1859893 1861044 1 tyrP tyrosine transporter TyrP Proteus mirabilis HI4320