PF02254

Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF02254
Protein list: lists the 28 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF02254
Description TrkA-N domain

Occurence in the database

PF02254 is associated with 28 different proteins
The 28 proteins are classified into 4 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1216 FBDBKF_06625 165942 167108 -1 trkA Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain Morganella morganii S1
1 group_1734 FBDBKF_11790 7878 9731 -1 kefB glutathione-regulated potassium-efflux system protein KefB Morganella morganii S1
2 group_2176 FBDBKF_16050 64277 66073 -1 ybaL YbaL family putative K(+) efflux transporter Morganella morganii S1
3 group_2402 FBDBKF_19095 7057 8433 1 trkA Trk system potassium transporter TrkA Morganella morganii S1
4 group_1216 EHELCC_09670 166514 167680 -1 trkA Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain Morganella morganii S2
5 group_1734 EHELCC_14515 124974 126827 1 kefB glutathione-regulated potassium-efflux system protein KefB Morganella morganii S2
6 group_2176 EHELCC_18655 21711 23507 -1 ybaL YbaL family putative K(+) efflux transporter Morganella morganii S2
7 group_2402 EHELCC_18840 7057 8433 1 trkA Trk system potassium transporter TrkA Morganella morganii S2
8 group_1216 NLDBIP_10050 166514 167680 -1 trkA Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain Morganella morganii S4
9 group_1734 NLDBIP_15610 128911 130764 1 kefB glutathione-regulated potassium-efflux system protein KefB Morganella morganii S4
10 group_2176 NLDBIP_17485 51716 53512 -1 ybaL YbaL family putative K(+) efflux transporter Morganella morganii S4
11 group_2402 NLDBIP_18855 7057 8433 1 trkA Trk system potassium transporter TrkA Morganella morganii S4
12 group_1216 LHKJJB_07705 49558 50724 1 trkA Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain Morganella morganii S3
13 group_1734 LHKJJB_15000 7878 9731 -1 kefB glutathione-regulated potassium-efflux system protein KefB Morganella morganii S3
14 group_2176 LHKJJB_17175 2676 4472 1 ybaL YbaL family putative K(+) efflux transporter Morganella morganii S3
15 group_2402 LHKJJB_18710 7057 8433 1 trkA Trk system potassium transporter TrkA Morganella morganii S3
16 group_1216 HKOGLL_07255 49558 50724 1 trkA Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain Morganella morganii S5
17 group_2176 HKOGLL_17220 51716 53512 -1 ybaL YbaL family putative K(+) efflux transporter Morganella morganii S5
18 group_2402 HKOGLL_18445 7057 8433 1 trkA Trk system potassium transporter TrkA Morganella morganii S5
19 group_1734 HKOGLL_19285 3620 5473 1 kefB glutathione-regulated potassium-efflux system protein KefB Morganella morganii S5
20 group_1734 F4V73_RS14865 208494 210332 1 kefB glutathione-regulated potassium-efflux system protein KefB Morganella psychrotolerans
21 group_1216 F4V73_RS15310 47216 48382 1 NAD-binding protein Morganella psychrotolerans
22 group_2176 F4V73_RS16220 54423 56243 1 ybaL YbaL family putative K(+) efflux transporter Morganella psychrotolerans
23 group_2402 F4V73_RS19070 21964 23340 -1 trkA Trk system potassium transporter TrkA Morganella psychrotolerans
24 group_1216 PMI_RS10430 2291451 2292563 -1 NAD-binding protein Proteus mirabilis HI4320
25 group_2176 PMI_RS10745 2364104 2365864 1 ybaL YbaL family putative K(+) efflux transporter Proteus mirabilis HI4320
26 group_1734 PMI_RS13855 3076116 3077978 -1 kefB glutathione-regulated potassium-efflux system protein KefB Proteus mirabilis HI4320
27 group_2402 PMI_RS16295 3597523 3598899 -1 trkA Trk system potassium transporter TrkA Proteus mirabilis HI4320