Homologs in group_1156

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06625 FBDBKF_06625 46.6 Morganella morganii S1 trkA Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain
EHELCC_09670 EHELCC_09670 46.6 Morganella morganii S2 trkA Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain
NLDBIP_10050 NLDBIP_10050 46.6 Morganella morganii S4 trkA Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain
LHKJJB_07705 LHKJJB_07705 46.6 Morganella morganii S3 trkA Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain
HKOGLL_07255 HKOGLL_07255 46.6 Morganella morganii S5 trkA Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain
F4V73_RS15310 F4V73_RS15310 46.1 Morganella psychrotolerans - NAD-binding protein

Distribution of the homologs in the orthogroup group_1156

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1156

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P31069 2.04e-52 182 35 5 333 1 kch Voltage-gated potassium channel Kch Escherichia coli (strain K12)
O27564 4.08e-14 75 28 5 191 1 mthK Calcium-gated potassium channel MthK Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
P56509 2.03e-13 75 31 8 225 4 Mfer_0534 Uncharacterized protein Mfer_0534 Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S)
Q58752 9.72e-12 68 28 5 188 4 MJ1357 Probable potassium channel protein 2 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q57604 7.44e-11 66 27 4 161 4 MJ0138.1 Potassium channel protein 1 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q979Z2 4.39e-07 54 25 3 180 1 tvoK Calcium-gated potassium channel TvoK Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
Q8LBL1 8.79e-07 53 36 3 98 1 TPK1 Two-pore potassium channel 1 Arabidopsis thaliana
Q8LIN5 1.71e-05 50 32 2 87 1 TPKB Two pore potassium channel b Oryza sativa subsp. japonica
Q9FWX6 2.11e-05 49 38 1 70 2 TPK4 Two-pore potassium channel 4 Arabidopsis thaliana
P97438 0.000191 47 36 2 77 1 Kcnk2 Potassium channel subfamily K member 2 Mus musculus
Q920B6 0.0002 47 36 2 77 1 Kcnk2 Potassium channel subfamily K member 2 Rattus norvegicus
O95069 0.000243 46 36 2 77 1 KCNK2 Potassium channel subfamily K member 2 Homo sapiens
Q795M8 0.000254 46 25 3 156 4 yugO Putative potassium channel protein YugO Bacillus subtilis (strain 168)
Q9Z351 0.000274 46 29 3 79 1 Kcnq2 Potassium voltage-gated channel subfamily KQT member 2 Mus musculus
O88943 0.000354 46 29 3 79 1 Kcnq2 Potassium voltage-gated channel subfamily KQT member 2 Rattus norvegicus
Q09470 0.000435 45 28 4 120 1 KCNA1 Potassium voltage-gated channel subfamily A member 1 Homo sapiens
O43526 0.000487 45 29 3 79 1 KCNQ2 Potassium voltage-gated channel subfamily KQT member 2 Homo sapiens
P10499 0.000492 45 28 4 120 1 Kcna1 Potassium voltage-gated channel subfamily A member 1 Rattus norvegicus
P16388 0.0005 45 28 4 120 1 Kcna1 Potassium voltage-gated channel subfamily A member 1 Mus musculus
B2RQA1 0.000503 45 24 2 125 2 Kcna10 Potassium voltage-gated channel subfamily A member 10 Mus musculus
Q05037 0.000516 45 19 3 183 1 KCNA4 Potassium voltage-gated channel subfamily A member 4 Bos taurus
P15385 0.000675 45 30 0 76 1 Kcna4 Potassium voltage-gated channel subfamily A member 4 Rattus norvegicus
Q16322 0.000727 45 24 1 107 1 KCNA10 Potassium voltage-gated channel subfamily A member 10 Homo sapiens
Q61423 0.00073 45 30 0 76 1 Kcna4 Potassium voltage-gated channel subfamily A member 4 Mus musculus
P22459 0.000789 45 30 0 76 1 KCNA4 Potassium voltage-gated channel subfamily A member 4 Homo sapiens
Q28527 0.000797 45 30 0 76 2 KCNA4 Potassium voltage-gated channel subfamily A member 4 Mustela putorius furo
P19024 0.001 45 28 0 76 1 Kcna5 Potassium voltage-gated channel subfamily A member 5 Rattus norvegicus

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS10430
Feature type CDS
Gene -
Product NAD-binding protein
Location 2291451 - 2292563 (strand: -1)
Length 1113 (nucleotides) / 370 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1156
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02254 TrkA-N domain
PF07885 Ion channel

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0569 Inorganic ion transport and metabolism (P)
Signal transduction mechanisms (T)		 PT Trk/Ktr K+ transport system regulatory component TrkA/KtrA/KtrC, RCK domain

Protein Sequence

MSFLLILNSLFIIYSILLSRGVYLDWEIHGFADWLKSLGILKLLDIPKVMLASALILLSFFMYMGARIAWCVSLILLVTIVFLDVAVYHQAGTQAYTSLALAIVLVISRRAFPHHSLTSAGFVAFICTISLLCFSMLGSLYIGDEFKPHITTLMDAFYFSIVCMTTLGFGDIVPISSNARMFTLTVVILGITVFTTSIVYVMGFLARGTRDIVKKRIAKMHDHFIIIGSSMLAAQLEKGLREQGKPVIAICSDKKQAMYDKEANIIEGDPTNVKTLQTANIRQASWVATLSESDAENTFILLTIQECPDLQAKLITIINKDENREKISRLRPDMLLSLASLGKEIMMKVLCGESINSSDVTDLLINKYLK

Flanking regions ( +/- flanking 50bp)

TATCGGCAGTCGTTAATTTTATGGAGACATCGTCTTTTAGCAGAAAGACGATGTCTTTCTTATTGATCTTGAATAGTCTTTTTATTATTTACTCGATATTACTTTCTCGTGGTGTTTATCTTGATTGGGAAATACACGGTTTTGCTGATTGGCTAAAATCGTTAGGTATATTGAAATTACTTGATATTCCTAAAGTGATGTTAGCGAGTGCACTTATTTTGCTCTCTTTCTTTATGTATATGGGGGCGCGGATTGCGTGGTGCGTTTCATTAATATTATTAGTGACGATCGTTTTTTTAGATGTCGCGGTTTATCACCAAGCTGGTACTCAAGCCTATACTTCATTAGCATTAGCCATTGTATTGGTTATCAGCCGGCGTGCTTTTCCTCATCATAGTTTAACCAGTGCCGGTTTTGTTGCTTTTATCTGTACGATTTCGCTACTGTGTTTCTCTATGTTAGGCAGCCTCTATATTGGTGATGAATTTAAACCACATATCACAACGTTAATGGATGCTTTTTACTTTTCCATTGTCTGTATGACAACACTCGGTTTTGGCGATATCGTTCCTATCTCAAGTAATGCGAGAATGTTTACCCTAACAGTGGTTATTTTGGGGATCACTGTTTTTACGACTTCTATTGTTTATGTGATGGGATTTTTGGCTCGTGGTACTCGCGATATTGTGAAGAAAAGGATCGCTAAAATGCATGATCATTTTATTATTATTGGCTCTTCAATGTTGGCAGCACAATTAGAGAAAGGGCTTAGAGAGCAAGGTAAACCGGTTATTGCGATTTGTTCGGATAAAAAGCAAGCCATGTATGATAAAGAAGCCAATATTATTGAAGGTGATCCAACCAATGTAAAAACATTACAAACGGCAAATATTCGCCAAGCGAGTTGGGTGGCGACGTTATCTGAAAGTGATGCGGAAAATACCTTTATTTTATTAACTATTCAAGAGTGCCCAGATCTTCAAGCGAAATTAATCACTATCATTAATAAAGATGAGAATAGAGAAAAAATAAGTCGATTACGTCCAGATATGCTGTTGTCTTTAGCTTCGTTAGGCAAAGAAATTATGATGAAAGTCCTTTGTGGTGAATCTATTAATTCGTCTGATGTTACTGATTTATTAATCAATAAATATTTAAAATAATGTATGTCAAAAATCACCCTTTACCTAAGAGAGTGATTGCAATAAGATGT