PF01292


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF01292, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 33 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF01292
Description Prokaryotic cytochrome b561

Occurence in the database

PF01292 is associated with 33 different proteins (see tab "Protein list" and "Profile")
The 33 proteins are classified into 5 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3170 FBDBKF_00575 94997 95587 1 Cytochrome b561 bacterial/Ni-hydrogenase domain-containing protein Morganella morganii S1
1 group_890 FBDBKF_04620 123340 123891 -1 cybB Cytochrome b561 Morganella morganii S1
2 group_2676 FBDBKF_04940 194137 194670 1 cybB cytochrome b561 Morganella morganii S1
3 group_70 FBDBKF_08050 146285 146941 -1 fdnI formate dehydrogenase-N subunit gamma Morganella morganii S1
4 group_70 FBDBKF_16130 16659 17309 1 fdoI formate dehydrogenase cytochrome b556 subunit Morganella morganii S1
5 group_3170 EHELCC_00970 213281 213871 -1 Cytochrome b561 bacterial/Ni-hydrogenase domain-containing protein Morganella morganii S2
6 group_890 EHELCC_05910 182797 183348 -1 cybB Cytochrome b561 Morganella morganii S2
7 group_2676 EHELCC_06230 253594 254127 1 cybB cytochrome b561 Morganella morganii S2
8 group_70 EHELCC_13880 120479 121135 -1 fdnI formate dehydrogenase-N subunit gamma Morganella morganii S2
9 group_70 EHELCC_16165 16659 17309 1 fdoI formate dehydrogenase cytochrome b556 subunit Morganella morganii S2
10 group_3170 NLDBIP_02490 466265 466855 1 Cytochrome b561 bacterial/Ni-hydrogenase domain-containing protein Morganella morganii S4
11 group_890 NLDBIP_06230 223862 224413 -1 cybB Cytochrome b561 Morganella morganii S4
12 group_2676 NLDBIP_06550 294659 295192 1 cybB cytochrome b561 Morganella morganii S4
13 group_70 NLDBIP_14325 141354 142010 -1 fdnI formate dehydrogenase-N subunit gamma Morganella morganii S4
14 group_70 NLDBIP_17175 44861 45511 -1 fdoI formate dehydrogenase cytochrome b556 subunit Morganella morganii S4
15 group_890 LHKJJB_03110 201386 201937 -1 cybB Cytochrome b561 Morganella morganii S3
16 group_2676 LHKJJB_03430 272183 272716 1 cybB cytochrome b561 Morganella morganii S3
17 group_3170 LHKJJB_04005 73506 74096 1 Cytochrome b561 bacterial/Ni-hydrogenase domain-containing protein Morganella morganii S3
18 group_70 LHKJJB_08525 17739 18395 1 fdnI formate dehydrogenase-N subunit gamma Morganella morganii S3
19 group_70 LHKJJB_17095 47963 48613 -1 fdoI formate dehydrogenase cytochrome b556 subunit Morganella morganii S3
20 group_3170 HKOGLL_03040 213486 214076 -1 Cytochrome b561 bacterial/Ni-hydrogenase domain-containing protein Morganella morganii S5
21 group_890 HKOGLL_06585 123250 123801 -1 cybB Cytochrome b561 Morganella morganii S5
22 group_2676 HKOGLL_06905 194047 194580 1 cybB cytochrome b561 Morganella morganii S5
23 group_70 HKOGLL_08075 17739 18395 1 fdnI formate dehydrogenase-N subunit gamma Morganella morganii S5
24 group_70 HKOGLL_16745 16659 17309 1 fdoI formate dehydrogenase cytochrome b556 subunit Morganella morganii S5
25 group_890 F4V73_RS09070 1896917 1897468 -1 cytochrome b Morganella psychrotolerans
26 group_70 F4V73_RS12945 198915 199574 1 fdnI formate dehydrogenase-N subunit gamma Morganella psychrotolerans
27 group_2676 F4V73_RS16080 19012 19545 1 cybB cytochrome b561 Morganella psychrotolerans
28 group_70 F4V73_RS17485 128891 129541 -1 fdoI formate dehydrogenase cytochrome b556 subunit Morganella psychrotolerans
29 group_3873 PMI_RS00320 93676 94473 -1 thiosulfate reductase cytochrome B subunit Proteus mirabilis HI4320
30 group_3873 PMI_RS08910 1950280 1951047 1 thiosulfate reductase cytochrome B subunit Proteus mirabilis HI4320
31 group_890 PMI_RS10445 2294592 2295146 -1 cytochrome b Proteus mirabilis HI4320
32 group_70 PMI_RS15385 3418420 3419076 -1 fdoI formate dehydrogenase cytochrome b556 subunit Proteus mirabilis HI4320