Orthogroup:group_960


Homologs in group_960

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05280 FBDBKF_05280 Morganella morganii S1 oppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
EHELCC_12310 EHELCC_12310 Morganella morganii S2 oppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
NLDBIP_12650 NLDBIP_12650 Morganella morganii S4 oppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
LHKJJB_12510 LHKJJB_12510 Morganella morganii S3 oppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
HKOGLL_11125 HKOGLL_11125 Morganella morganii S5 oppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
F4V73_RS05735 F4V73_RS05735 Morganella psychrotolerans - ABC transporter ATP-binding protein
PMI_RS07125 PMI_RS07125 Proteus mirabilis HI4320 - ABC transporter ATP-binding protein

Distribution of group_960 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_960 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_960

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_960.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 oppD 5
2 - 2

Product

# Product Occurence
1 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 5
2 ABC transporter ATP-binding protein 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0444 7 EP Amino acid transport and metabolism (E)
Inorganic ion transport and metabolism (P)		 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K15583 7 oligopeptide transport system ATP-binding protein beta-Lactam resistance
ABC transporters
Quorum sensing		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00005 7 ABC transporter
PF08352 7 Oligopeptide/dipeptide transporter, C-terminal region

Annotations of the 577 SwissProt hits

Annotation Number of occurrences
Aliphatic sulfonates import ATP-binding protein SsuB 1
Arginine transport ATP-binding protein ArtP 1
Di/tripeptide transport ATP-binding protein DppD 1
Di/tripeptide transport ATP-binding protein DppF 1
Dipeptide transport ATP-binding protein DppD 7
Dipeptide transport ATP-binding protein DppF 3
Energy-coupling factor transporter ATP-binding protein EcfA 4
Energy-coupling factor transporter ATP-binding protein EcfA1 22
Energy-coupling factor transporter ATP-binding protein EcfA2 5
Energy-coupling factor transporter ATP-binding protein EcfA3 1
Fe(3+) ions import ATP-binding protein FbpC 1
Glutamate/glutamine/aspartate/asparagine transport ATP-binding protein BztD 1
Glutamine transport ATP-binding protein GlnQ 1
Glutathione import ATP-binding protein GsiA 16
Glycine betaine transport ATP-binding protein OpuAA 2
Glycine betaine/carnitine transport ATP-binding protein GbuA 1
L-cystine transport system ATP-binding protein TcyN 1
Lipoprotein-releasing system ATP-binding protein LolD 40
Lipoprotein-releasing system ATP-binding protein LolD 1 1
Macrolide export ATP-binding/permease protein MacB 8
Macrolide export ATP-binding/permease protein MacB 1 4
Macrolide export ATP-binding/permease protein MacB 2 2
Metal-staphylopine import system ATP-binding protein CntD 2
Metal-staphylopine import system ATP-binding protein CntF 2
Methionine import ATP-binding protein MetN 137
Methionine import ATP-binding protein MetN 1 54
Methionine import ATP-binding protein MetN 2 54
Methionine import ATP-binding protein MetN 3 8
Methionine import ATP-binding protein MetN 4 1
Molybdenum import ATP-binding protein ModC 2
Nickel import ATP-binding protein NikD 16
Nickel import ATP-binding protein NikE 16
Nickel import system ATP-binding protein NikD 9
Nickel import system ATP-binding protein NikE 8
Nitrate import ATP-binding protein NrtD 1
Nitrate transport protein NasD 1
Oligopeptide transport ATP-binding protein AmiE 2
Oligopeptide transport ATP-binding protein AmiF 1
Oligopeptide transport ATP-binding protein AppD 1
Oligopeptide transport ATP-binding protein AppF 1
Oligopeptide transport ATP-binding protein OppD 8
Oligopeptide transport ATP-binding protein OppF 14
Peptide transport system ATP-binding protein SapD 5
Peptide transport system ATP-binding protein SapF 4
Peptidoglycan transport ATP-binding protein YejF 1
Phosphate import ATP-binding protein PstB 9
Phosphate import ATP-binding protein PstB 1 3
Probable ABC transporter ATP-binding protein PEB1C 2
Probable D,D-dipeptide transport ATP-binding protein DdpD 1
Probable D,D-dipeptide transport ATP-binding protein DdpF 1
Probable amino-acid ABC transporter ATP-binding protein y4tH 1
Probable peptide ABC transporter ATP-binding protein y4tR 1
Probable peptide ABC transporter ATP-binding protein y4tS 1
Probable sulfate/thiosulfate import ATP-binding protein CysA 1
Putative ABC transporter ATP-binding protein CPE0195 1
Putative ABC transporter ATP-binding protein GSU1281 1
Putative ABC transporter ATP-binding protein MTBMA_c05830 1
Putative ABC transporter ATP-binding protein PH1815 1
Putative ABC transporter ATP-binding protein PYRAB03730 1
Putative hemin import ATP-binding protein HrtA 13
Putative oligopeptide transport ATP-binding protein YkfD 1
Putative peptide import ATP-binding protein BAB2_0817 1
Putative peptide import ATP-binding protein BAB2_0818 1
Putative peptide import ATP-binding protein BAB2_1052 1
Putative peptide import ATP-binding protein BAB2_1053 1
Putative peptide import ATP-binding protein BMEII0205 1
Putative peptide import ATP-binding protein BMEII0206 1
Putative peptide import ATP-binding protein BMEII0863 1
Putative peptide import ATP-binding protein BMEII0864 1
Putative peptide import ATP-binding protein BOV_A0347 1
Putative peptide import ATP-binding protein BOV_A0348 1
Putative peptide import ATP-binding protein BRA0404/BS1330_II0401 1
Putative peptide import ATP-binding protein BRA0405/BS1330_II0402 1
Putative peptide import ATP-binding protein BRA1094/BS1330_II1086 1
Putative peptide import ATP-binding protein BruAb2_0796 1
Putative peptide import ATP-binding protein BruAb2_0797 1
Putative peptide import ATP-binding protein BruAb2_1033 1
Putative peptide import ATP-binding protein BruAb2_1034 1
Putative phosphonates utilization ATP-binding protein PhnK 1
Putrescine export system ATP-binding protein SapD 1
Putrescine export system ATP-binding protein SapF 1
Pyoverdine export ATP-binding/permease protein PvdT 2
Spermidine/putrescine import ATP-binding protein PotA 9
Sulfate/thiosulfate import ATP-binding protein CysA 15
Sulfate/thiosulfate import ATP-binding protein CysA (Fragment) 1
Sulfate/thiosulfate import ATP-binding protein CysA 1 1
Sulfate/thiosulfate import ATP-binding protein CysA 2 2
Sulfate/thiosulfate import ATP-binding protein cysA 1
Trehalose import ATP-binding protein SugC 2
Trimethylamine N-oxide transport system ATP-binding protein TmoW 1
Uncharacterized ABC transporter ATP-binding protein MJ0796 1
Uncharacterized ABC transporter ATP-binding protein MT1318 1
Uncharacterized ABC transporter ATP-binding protein Mb1312c 1
Uncharacterized ABC transporter ATP-binding protein Rv1281c 1
Uncharacterized ABC transporter ATP-binding protein YbbA 3
Uncharacterized ABC transporter ATP-binding protein YdcT 1
Uncharacterized ABC transporter ATP-binding protein YejF 1
Uncharacterized ABC transporter ATP-binding protein YknY 1
Uncharacterized ABC transporter ATP-binding protein YvcR 1
Uncharacterized ABC transporter ATP-binding protein YvrO 1

Protein length

Min length 324
Max length 328
Mean length (sd) 324.7 (1.5)
Median length 324.0

Protein length distribution