Homologs in group_3873

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS08910 PMI_RS08910 54.1 Proteus mirabilis HI4320 - thiosulfate reductase cytochrome B subunit

Distribution of the homologs in the orthogroup group_3873

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3873

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P77409 7.18e-102 300 60 2 266 2 ydhU Putative cytochrome YdhU Escherichia coli (strain K12)
P37602 2.07e-71 222 54 3 242 1 phsC Thiosulfate reductase cytochrome B subunit PhsC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS00320
Feature type CDS
Gene -
Product thiosulfate reductase cytochrome B subunit
Location 93676 - 94473 (strand: -1)
Length 798 (nucleotides) / 265 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3873
Orthogroup size 2
N. genomes 1

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Genomic region

Domains

PF01292 Prokaryotic cytochrome b561

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4117 Inorganic ion transport and metabolism (P) P Thiosulfate reductase cytochrome b subunit

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K08354 thiosulfate reductase cytochrome b subunit Sulfur metabolism
Metabolic pathways
Microbial metabolism in diverse environments		 -

Protein Sequence

MSAINIMPNAAQFQASLKQYVLIYTPDYLPLWLIVAGVLFVGMLLVLALHGFLRYRFATPHGEHHQEEKLYLYSKAVRLWHWSNATLFILLLLSGGINHFALLSAHDTALLVNVHEICGYLLLVCWLSFVLINLVSGNGKFYRIDSKNWLQRVLMQTRFYLYGIIKGEDHPFPATPKVKFNPLQQMAYLGVMYALVPLLLITGILLQNPMFIPADAVLFKAWLLIIHQILAVCSVFFIFGHLYLCTTGRTPFQTFRSMVDGYHRH

Flanking regions ( +/- flanking 50bp)

CCGCATCTTTATCGACGTGTTGGACCTCATGTACAAGGGGGAGATAACGTATGAGTGCAATAAATATCATGCCAAATGCAGCACAATTTCAAGCCTCACTCAAACAGTATGTCTTAATCTATACACCGGACTATTTACCACTTTGGTTAATTGTTGCCGGCGTATTATTTGTCGGCATGCTACTTGTACTCGCACTTCATGGTTTTTTACGTTACCGCTTTGCCACACCCCATGGAGAGCATCATCAAGAAGAGAAACTCTATCTTTACTCAAAAGCGGTACGTTTATGGCATTGGAGTAATGCAACTTTATTTATCTTACTCCTTCTCAGTGGCGGGATTAACCATTTCGCCCTACTCTCGGCACATGACACGGCGTTACTCGTCAATGTGCATGAAATTTGTGGTTATCTACTCTTAGTATGCTGGTTGTCCTTTGTATTAATTAATCTTGTTAGTGGCAATGGTAAATTTTACCGTATTGACAGTAAAAACTGGTTGCAACGAGTATTAATGCAAACACGTTTTTATCTTTACGGCATTATTAAGGGGGAAGATCATCCTTTTCCAGCCACTCCCAAGGTTAAATTTAATCCACTGCAACAAATGGCTTATTTAGGTGTGATGTATGCATTAGTACCATTACTTTTAATCACGGGGATCTTACTGCAAAATCCCATGTTTATCCCTGCTGATGCTGTGCTATTTAAAGCTTGGTTATTAATAATTCACCAAATACTAGCCGTGTGTAGTGTCTTTTTTATCTTTGGTCACCTTTACCTGTGTACCACCGGAAGAACGCCATTCCAAACCTTTCGCAGTATGGTTGACGGCTACCATAGACACTAATAAATAGATGGATCAAGGAGCTTATATGTCAGTCCCTTCACAGGAAAATA