Homologs in group_3170

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00575 FBDBKF_00575 100.0 Morganella morganii S1 - Cytochrome b561 bacterial/Ni-hydrogenase domain-containing protein
NLDBIP_02490 NLDBIP_02490 100.0 Morganella morganii S4 - Cytochrome b561 bacterial/Ni-hydrogenase domain-containing protein
LHKJJB_04005 LHKJJB_04005 100.0 Morganella morganii S3 - Cytochrome b561 bacterial/Ni-hydrogenase domain-containing protein
HKOGLL_03040 HKOGLL_03040 100.0 Morganella morganii S5 - Cytochrome b561 bacterial/Ni-hydrogenase domain-containing protein

Distribution of the homologs in the orthogroup group_3170

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3170

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_00970
Feature type CDS
Gene -
Product Cytochrome b561 bacterial/Ni-hydrogenase domain-containing protein
Location 213281 - 213871 (strand: -1)
Length 591 (nucleotides) / 196 (amino acids)

Contig

Accession ZDB_213
Length 680219 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3170
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF01292 Prokaryotic cytochrome b561

Protein Sequence

MIIFSSLRQFMRIYQSPAVLILHFIIIISVILQIVISNWMSVSVTGVIPASGYRLFFTWMHIITGLSFWVSGTLLIALCFHQRGIKHYYPWAFGCFSQIATDCRAMLHGKLPESSPGGLATSVQGLGLGALMLVVLSGTAWLILSAGSAYAGEIRNLHKTLTGLIEAYIIGHGAMGLLHFILWLRRKNTPDNNQPD

Flanking regions ( +/- flanking 50bp)

TATAATTACGCAGACATTATTTAATCTTTATTACGGACGGAGTTATACCAATGATAATATTCTCATCTCTGCGGCAGTTTATGCGTATTTATCAGTCTCCGGCAGTATTGATATTGCATTTCATTATCATTATCTCCGTTATTCTTCAGATTGTGATCAGCAACTGGATGTCTGTTTCCGTCACCGGCGTTATTCCCGCAAGCGGCTATCGCTTATTTTTTACCTGGATGCATATTATTACCGGTCTTTCATTCTGGGTTTCCGGTACCCTGCTTATTGCTCTCTGCTTTCATCAGCGGGGAATAAAGCATTATTACCCGTGGGCTTTCGGCTGTTTTTCGCAGATAGCAACTGACTGCCGTGCCATGCTGCACGGGAAATTACCGGAATCCTCTCCCGGAGGTCTGGCAACCAGCGTTCAGGGGCTGGGTCTCGGGGCTCTGATGCTGGTCGTGCTATCCGGTACAGCCTGGCTTATATTATCGGCGGGGTCAGCTTATGCCGGTGAAATACGTAACCTGCACAAAACGCTGACGGGACTGATTGAAGCGTATATTATTGGTCATGGCGCAATGGGGTTGTTACATTTTATACTCTGGTTGCGGCGAAAAAATACTCCGGATAATAATCAGCCGGACTGATTTTTTATCCGGAGATGGCATATCCGTCAGTACCTATGTAAAATAATAAG