PF00999


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00999, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 27 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00999
Description Sodium/hydrogen exchanger family

Occurence in the database

PF00999 is associated with 27 different proteins (see tab "Protein list" and "Profile")
The 27 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2714 FBDBKF_06880 41647 43284 1 nhaP Na+/H+ antiporter Morganella morganii S1
1 group_1691 FBDBKF_11790 7878 9731 -1 kefB glutathione-regulated potassium-efflux system protein KefB Morganella morganii S1
2 group_2139 FBDBKF_16050 64277 66073 -1 ybaL YbaL family putative K(+) efflux transporter Morganella morganii S1
3 group_2223 FBDBKF_16990 26647 28296 -1 nhaP Na+/H+ antiporter Morganella morganii S1
4 group_2714 EHELCC_04090 142902 144539 -1 nhaP Na+/H+ antiporter Morganella morganii S2
5 group_1691 EHELCC_14515 124974 126827 1 kefB glutathione-regulated potassium-efflux system protein KefB Morganella morganii S2
6 group_2223 EHELCC_16600 40214 41863 1 nhaP Na+/H+ antiporter Morganella morganii S2
7 group_2139 EHELCC_18655 21711 23507 -1 ybaL YbaL family putative K(+) efflux transporter Morganella morganii S2
8 group_2714 NLDBIP_04090 142698 144335 -1 nhaP Na+/H+ antiporter Morganella morganii S4
9 group_1691 NLDBIP_15610 128911 130764 1 kefB glutathione-regulated potassium-efflux system protein KefB Morganella morganii S4
10 group_2223 NLDBIP_16810 40214 41863 1 nhaP Na+/H+ antiporter Morganella morganii S4
11 group_2139 NLDBIP_17485 51716 53512 -1 ybaL YbaL family putative K(+) efflux transporter Morganella morganii S4
12 group_2714 LHKJJB_09920 142812 144449 -1 nhaP Na+/H+ antiporter Morganella morganii S3
13 group_1691 LHKJJB_15000 7878 9731 -1 kefB glutathione-regulated potassium-efflux system protein KefB Morganella morganii S3
14 group_2223 LHKJJB_16660 26647 28296 -1 nhaP Na+/H+ antiporter Morganella morganii S3
15 group_2139 LHKJJB_17175 2676 4472 1 ybaL YbaL family putative K(+) efflux transporter Morganella morganii S3
16 group_2714 HKOGLL_09055 46603 48240 1 nhaP Na+/H+ antiporter Morganella morganii S5
17 group_2139 HKOGLL_17220 51716 53512 -1 ybaL YbaL family putative K(+) efflux transporter Morganella morganii S5
18 group_2223 HKOGLL_17625 26647 28296 -1 nhaP Na+/H+ antiporter Morganella morganii S5
19 group_1691 HKOGLL_19285 3620 5473 1 kefB glutathione-regulated potassium-efflux system protein KefB Morganella morganii S5
20 group_2714 F4V73_RS12595 114470 116107 1 Na+/H+ antiporter Morganella psychrotolerans
21 group_1691 F4V73_RS14865 208494 210332 1 kefB glutathione-regulated potassium-efflux system protein KefB Morganella psychrotolerans
22 group_2139 F4V73_RS16220 54423 56243 1 ybaL YbaL family putative K(+) efflux transporter Morganella psychrotolerans
23 group_2223 F4V73_RS18450 24880 26529 -1 Na+/H+ antiporter Morganella psychrotolerans
24 group_2139 PMI_RS10745 2364104 2365864 1 ybaL YbaL family putative K(+) efflux transporter Proteus mirabilis HI4320
25 group_1691 PMI_RS13855 3076116 3077978 -1 kefB glutathione-regulated potassium-efflux system protein KefB Proteus mirabilis HI4320
26 group_2223 PMI_RS17525 3846850 3848499 1 Na+/H+ antiporter Proteus mirabilis HI4320