Orthogroup:group_2260



Homologs in group_2260

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17400 FBDBKF_17400 Morganella morganii S1 yajC preprotein translocase subunit YajC
EHELCC_17295 EHELCC_17295 Morganella morganii S2 yajC preprotein translocase subunit YajC
NLDBIP_17900 NLDBIP_17900 Morganella morganii S4 yajC preprotein translocase subunit YajC
LHKJJB_17820 LHKJJB_17820 Morganella morganii S3 yajC preprotein translocase subunit YajC
HKOGLL_17830 HKOGLL_17830 Morganella morganii S5 yajC preprotein translocase subunit YajC
F4V73_RS16575 F4V73_RS16575 Morganella psychrotolerans yajC preprotein translocase subunit YajC
PMI_RS00370 PMI_RS00370 Proteus mirabilis HI4320 yajC preprotein translocase subunit YajC

Distribution of group_2260 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_2260 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2260

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_2260.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 yajC 7

Product

# Product Occurence
1 preprotein translocase subunit YajC 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1862 7 U Intracellular trafficking, secretion, and vesicular transport (U) Protein translocase subunit YajC

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03210 7 preprotein translocase subunit YajC Quorum sensing
Protein export
Bacterial secretion system
-

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02699 7 Preprotein translocase subunit

Annotations of the 28 SwissProt hits

Annotation Number of occurrences
Sec translocon accessory complex subunit YajC 27
Sec translocon accessory complex subunit YrbF 1

Protein length

Unique protein length 111

Protein length distribution