PF00672


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00672, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 80 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00672
Description HAMP domain

Occurence in the database

PF00672 is associated with 80 different proteins (see tab "Protein list" and "Profile")
The 80 proteins are classified into 13 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_59 FBDBKF_00780 141430 143004 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S1
1 group_59 FBDBKF_00785 143117 144802 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S1
2 group_2600 FBDBKF_03410 85309 86874 1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S1
3 group_1438 FBDBKF_09070 30003 32006 -1 Signal transduction histidine kinase regulating phosphoglycerate transport system Morganella morganii S1
4 group_1476 FBDBKF_09510 143912 145654 -1 narX nitrate/nitrite two-component system sensor histidine kinase NarX Morganella morganii S1
5 group_2828 FBDBKF_10245 1153 3087 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S1
6 group_1632 FBDBKF_10745 116808 118142 1 envZ two-component system sensor histidine kinase EnvZ Morganella morganii S1
7 group_1773 FBDBKF_12335 130145 131515 1 cpxA envelope stress sensor histidine kinase CpxA Morganella morganii S1
8 group_1944 FBDBKF_14580 10320 11789 1 phoQ two-component system sensor histidine kinase PhoQ Morganella morganii S1
9 group_407 FBDBKF_16475 18096 19457 -1 baeS two-component system sensor histidine kinase BaeS Morganella morganii S1
10 group_3044 FBDBKF_18180 1914 3473 1 Methyl-accepting chemotaxis protein I (Serine chemoreceptor protein) Morganella morganii S1
11 group_59 EHELCC_00760 164066 165751 1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S2
12 group_59 EHELCC_00765 165864 167438 1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S2
13 group_2600 EHELCC_07125 160229 161794 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S2
14 group_407 EHELCC_08340 135082 136443 -1 baeS two-component system sensor histidine kinase BaeS Morganella morganii S2
15 group_1476 EHELCC_09900 450 2192 1 narX nitrate/nitrite two-component system sensor histidine kinase NarX Morganella morganii S2
16 group_1438 EHELCC_10340 114098 116101 1 Signal transduction histidine kinase regulating phosphoglycerate transport system Morganella morganii S2
17 group_1773 EHELCC_13970 3190 4560 -1 cpxA envelope stress sensor histidine kinase CpxA Morganella morganii S2
18 group_2828 EHELCC_14580 1143 3077 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S2
19 group_1632 EHELCC_15080 116798 118132 1 envZ two-component system sensor histidine kinase EnvZ Morganella morganii S2
20 group_1944 EHELCC_15385 40396 41865 1 phoQ two-component system sensor histidine kinase PhoQ Morganella morganii S2
21 group_3044 EHELCC_18215 1787 3346 1 Methyl-accepting chemotaxis protein I (Serine chemoreceptor protein) Morganella morganii S2
22 group_59 NLDBIP_02695 512698 514272 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S4
23 group_59 NLDBIP_02700 514385 516070 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S4
24 group_2600 NLDBIP_07450 160102 161667 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S4
25 group_407 NLDBIP_08665 135082 136443 -1 baeS two-component system sensor histidine kinase BaeS Morganella morganii S4
26 group_1438 NLDBIP_10685 92369 94372 1 Signal transduction histidine kinase regulating phosphoglycerate transport system Morganella morganii S4
27 group_2828 NLDBIP_14410 1143 3077 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S4
28 group_1632 NLDBIP_14910 116798 118132 1 envZ two-component system sensor histidine kinase EnvZ Morganella morganii S4
29 group_1773 NLDBIP_15065 7127 8497 -1 cpxA envelope stress sensor histidine kinase CpxA Morganella morganii S4
30 group_1944 NLDBIP_15915 40396 41865 1 phoQ two-component system sensor histidine kinase PhoQ Morganella morganii S4
31 group_3044 NLDBIP_18140 1988 3547 1 Methyl-accepting chemotaxis protein I (Serine chemoreceptor protein) Morganella morganii S4
32 group_1476 NLDBIP_19220 448 2190 1 narX nitrate/nitrite two-component system sensor histidine kinase NarX Morganella morganii S4
33 group_59 LHKJJB_04210 119939 121513 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S3
34 group_59 LHKJJB_04215 121626 123311 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S3
35 group_407 LHKJJB_05600 120716 122077 1 baeS two-component system sensor histidine kinase BaeS Morganella morganii S3
36 group_2600 LHKJJB_06985 123848 125413 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S3
37 group_1438 LHKJJB_10670 97156 99159 -1 Signal transduction histidine kinase regulating phosphoglycerate transport system Morganella morganii S3
38 group_1632 LHKJJB_14435 23594 24928 -1 envZ two-component system sensor histidine kinase EnvZ Morganella morganii S3
39 group_2828 LHKJJB_14935 138649 140583 1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S3
40 group_1773 LHKJJB_15545 130145 131515 1 cpxA envelope stress sensor histidine kinase CpxA Morganella morganii S3
41 group_1944 LHKJJB_15925 74821 76290 -1 phoQ two-component system sensor histidine kinase PhoQ Morganella morganii S3
42 group_3044 LHKJJB_18335 1826 3385 1 Methyl-accepting chemotaxis protein I (Serine chemoreceptor protein) Morganella morganii S3
43 group_1476 LHKJJB_19150 19879 21621 -1 narX nitrate/nitrite two-component system sensor histidine kinase NarX Morganella morganii S3
44 group_59 HKOGLL_02830 164271 165956 1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S5
45 group_59 HKOGLL_02835 166069 167643 1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S5
46 group_2600 HKOGLL_03945 107974 109539 1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S5
47 group_407 HKOGLL_05315 119673 121034 -1 baeS two-component system sensor histidine kinase BaeS Morganella morganii S5
48 group_1632 HKOGLL_13055 23594 24928 -1 envZ two-component system sensor histidine kinase EnvZ Morganella morganii S5
49 group_2828 HKOGLL_13555 138649 140583 1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S5
50 group_1438 HKOGLL_13730 30457 32460 -1 Signal transduction histidine kinase regulating phosphoglycerate transport system Morganella morganii S5
51 group_1773 HKOGLL_14665 116808 118178 1 cpxA envelope stress sensor histidine kinase CpxA Morganella morganii S5
52 group_1944 HKOGLL_15045 74033 75502 -1 phoQ two-component system sensor histidine kinase PhoQ Morganella morganii S5
53 group_3044 HKOGLL_18070 1804 3363 1 Methyl-accepting chemotaxis protein I (Serine chemoreceptor protein) Morganella morganii S5
54 group_1476 HKOGLL_18930 19879 21621 -1 narX nitrate/nitrite two-component system sensor histidine kinase NarX Morganella morganii S5
55 group_407 F4V73_RS02990 634008 635378 -1 baeS two-component system sensor histidine kinase BaeS Morganella psychrotolerans
56 group_646 F4V73_RS03910 828333 829730 -1 Cu(+)/Ag(+) sensor histidine kinase Morganella psychrotolerans
57 group_646 F4V73_RS04495 950883 952220 1 ATP-binding protein Morganella psychrotolerans
58 group_59 F4V73_RS06780 1406352 1407926 -1 methyl-accepting chemotaxis protein Morganella psychrotolerans
59 group_59 F4V73_RS06785 1408042 1409727 -1 methyl-accepting chemotaxis protein Morganella psychrotolerans
60 group_536 F4V73_RS07265 1511877 1513316 -1 HAMP domain-containing sensor histidine kinase Morganella psychrotolerans
61 group_1944 F4V73_RS07375 1538552 1540018 1 phoQ two-component system sensor histidine kinase PhoQ Morganella psychrotolerans
62 group_59 F4V73_RS10015 108871 110526 -1 methyl-accepting chemotaxis protein Morganella psychrotolerans
63 group_1476 F4V73_RS10460 208798 210498 1 narX nitrate/nitrite two-component system sensor histidine kinase NarX Morganella psychrotolerans
64 group_1438 F4V73_RS10875 312776 314785 1 ATP-binding protein Morganella psychrotolerans
65 group_2600 F4V73_RS11490 443332 444897 -1 methyl-accepting chemotaxis protein Morganella psychrotolerans
66 group_2828 F4V73_RS13960 1331 3271 -1 methyl-accepting chemotaxis protein Morganella psychrotolerans
67 group_1632 F4V73_RS14460 120601 121935 1 envZ two-component system sensor histidine kinase EnvZ Morganella psychrotolerans
68 group_1773 F4V73_RS17165 64599 65969 1 cpxA envelope stress sensor histidine kinase CpxA Morganella psychrotolerans
69 group_2454 PMI_RS05695 1239665 1241218 1 methyl-accepting chemotaxis protein Proteus mirabilis HI4320
70 group_407 PMI_RS07745 1695686 1697062 1 baeS two-component system sensor histidine kinase BaeS Proteus mirabilis HI4320
71 group_2454 PMI_RS08130 1775601 1777247 -1 methyl-accepting chemotaxis protein Proteus mirabilis HI4320
72 group_2454 PMI_RS08135 1777307 1779013 -1 methyl-accepting chemotaxis protein Proteus mirabilis HI4320
73 group_2454 PMI_RS11775 2603326 2604846 -1 methyl-accepting chemotaxis protein Proteus mirabilis HI4320
74 group_1438 PMI_RS11905 2628882 2631257 -1 ATP-binding protein Proteus mirabilis HI4320
75 group_2454 PMI_RS13870 3080908 3082599 1 methyl-accepting chemotaxis protein Proteus mirabilis HI4320
76 group_2454 PMI_RS13875 3083055 3084782 1 methyl-accepting chemotaxis protein Proteus mirabilis HI4320
77 group_1632 PMI_RS14295 3172721 3174061 1 envZ two-component system sensor histidine kinase EnvZ Proteus mirabilis HI4320
78 group_1773 PMI_RS15815 3512374 3513741 -1 cpxA envelope stress sensor histidine kinase CpxA Proteus mirabilis HI4320
79 group_1476 PMI_RS17755 3895690 3897519 -1 narX nitrate/nitrite two-component system sensor histidine kinase NarX Proteus mirabilis HI4320