Orthogroup:group_59


Homologs in group_59

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13 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_00780 FBDBKF_00780 Morganella morganii S1 tar Methyl-accepting chemotaxis protein (MCP)
FBDBKF_00785 FBDBKF_00785 Morganella morganii S1 tar Methyl-accepting chemotaxis protein (MCP)
EHELCC_00760 EHELCC_00760 Morganella morganii S2 tar Methyl-accepting chemotaxis protein (MCP)
EHELCC_00765 EHELCC_00765 Morganella morganii S2 tar Methyl-accepting chemotaxis protein (MCP)
NLDBIP_02695 NLDBIP_02695 Morganella morganii S4 tar Methyl-accepting chemotaxis protein (MCP)
NLDBIP_02700 NLDBIP_02700 Morganella morganii S4 tar Methyl-accepting chemotaxis protein (MCP)
LHKJJB_04210 LHKJJB_04210 Morganella morganii S3 tar Methyl-accepting chemotaxis protein (MCP)
LHKJJB_04215 LHKJJB_04215 Morganella morganii S3 tar Methyl-accepting chemotaxis protein (MCP)
HKOGLL_02830 HKOGLL_02830 Morganella morganii S5 tar Methyl-accepting chemotaxis protein (MCP)
HKOGLL_02835 HKOGLL_02835 Morganella morganii S5 tar Methyl-accepting chemotaxis protein (MCP)
F4V73_RS06780 F4V73_RS06780 Morganella psychrotolerans - methyl-accepting chemotaxis protein
F4V73_RS06785 F4V73_RS06785 Morganella psychrotolerans - methyl-accepting chemotaxis protein
F4V73_RS10015 F4V73_RS10015 Morganella psychrotolerans - methyl-accepting chemotaxis protein

Distribution of group_59 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_59 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_59

Orthogroup content: 13 members

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This page summarizes the annotation of all members of the orthologous group group_59.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 tar 10
2 - 3

Product

# Product Occurence
1 Methyl-accepting chemotaxis protein (MCP) 10
2 methyl-accepting chemotaxis protein 3

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0840 13 T Signal transduction mechanisms (T) Methyl-accepting chemotaxis protein (MCP)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03406 12 methyl-accepting chemotaxis protein Two-component system
Bacterial chemotaxis		 -
K05874 1 methyl-accepting chemotaxis protein I, serine sensor receptor Two-component system
Bacterial chemotaxis		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00015 13 Methyl-accepting chemotaxis protein (MCP) signalling domain
PF00672 13 HAMP domain
PF02203 13 Tar ligand binding domain homologue

Annotations of the 88 SwissProt hits

Annotation Number of occurrences
Aerotaxis receptor 1
Biofilm dispersion protein BdlA 1
Chemoreceptor McpA 1
Chemoreceptor protein A 1
Frizzy aggregation protein FrzCD 1
Halobacterial transducer protein 9 1
Heme-based aerotactic transducer HemAT 2
Methyl-accepting chemotaxis aspartate transducer 1
Methyl-accepting chemotaxis citrate transducer 1
Methyl-accepting chemotaxis protein 1 1
Methyl-accepting chemotaxis protein 2 1
Methyl-accepting chemotaxis protein 3 1
Methyl-accepting chemotaxis protein 4 1
Methyl-accepting chemotaxis protein Aer 1
Methyl-accepting chemotaxis protein Amb0994 1
Methyl-accepting chemotaxis protein Amb2333 1
Methyl-accepting chemotaxis protein CtpH 1
Methyl-accepting chemotaxis protein CtpL 1
Methyl-accepting chemotaxis protein CtpM 1
Methyl-accepting chemotaxis protein HlyB 1
Methyl-accepting chemotaxis protein I 1
Methyl-accepting chemotaxis protein II 2
Methyl-accepting chemotaxis protein III 1
Methyl-accepting chemotaxis protein IV 1
Methyl-accepting chemotaxis protein McpA 3
Methyl-accepting chemotaxis protein McpB 2
Methyl-accepting chemotaxis protein McpC 1
Methyl-accepting chemotaxis protein McpG 1
Methyl-accepting chemotaxis protein McpH 1
Methyl-accepting chemotaxis protein McpK 1
Methyl-accepting chemotaxis protein McpN 1
Methyl-accepting chemotaxis protein McpP 1
Methyl-accepting chemotaxis protein McpQ 1
Methyl-accepting chemotaxis protein McpS 1
Methyl-accepting chemotaxis protein McpU 1
Methyl-accepting chemotaxis protein NahY 1
Methyl-accepting chemotaxis protein PcaY 2
Methyl-accepting chemotaxis protein PctA 1
Methyl-accepting chemotaxis protein PctB 1
Methyl-accepting chemotaxis protein PctC 1
Methyl-accepting chemotaxis protein PscA 1
Methyl-accepting chemotaxis protein TlpA 1
Methyl-accepting chemotaxis protein TlpB 1
Methyl-accepting chemotaxis protein TlpC 1
Methyl-accepting chemotaxis protein TlpQ 1
Methyl-accepting chemotaxis serine transducer 1
Probable chemoreceptor McpE 1
Probable chemoreceptor y4fA 1
Probable chemoreceptor y4sI 1
Probable methyl-accepting chemotaxis protein BT9727_0355 1
Probable methyl-accepting chemotaxis protein BT9727_0469 1
Protein PilJ 1
Putative methyl-accepting chemotaxis AlkN 2
Putative methyl-accepting chemotaxis protein YoaH 1
Putative methyl-accepting chemotaxis protein sll0041 1
Putative sensory transducer protein 1
Putative sensory transducer protein YfmS 1
Putative sensory transducer protein YvaQ 1
Sensory rhodopsin I transducer 3
Sensory rhodopsin II transducer 4
Sensory rhodopsin II transducer (Fragment) 1
Toxin coregulated pilus biosynthesis protein I 2
Transducer protein BasT 1
Transducer protein Car 1
Transducer protein CosT 2
Transducer protein Htr13 1
Transducer protein Htr18 1
Transducer protein Htr4 2
Transducer protein Htr6 1
Transducer protein Htr7 2
Transducer protein Htr8 1
Transducer protein MpcT 1

Protein length

Min length 524
Max length 561
Mean length (sd) 543.2 (18.6)
Median length 551.0

Protein length distribution