Orthogroup:group_646



Homologs in group_646

Help

7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_02145 FBDBKF_02145 Morganella morganii S1 kdpD K+-sensing histidine kinase KdpD
EHELCC_02615 EHELCC_02615 Morganella morganii S2 kdpD K+-sensing histidine kinase KdpD
NLDBIP_00845 NLDBIP_00845 Morganella morganii S4 kdpD K+-sensing histidine kinase KdpD
LHKJJB_01190 LHKJJB_01190 Morganella morganii S3 kdpD K+-sensing histidine kinase KdpD
HKOGLL_01230 HKOGLL_01230 Morganella morganii S5 kdpD K+-sensing histidine kinase KdpD
F4V73_RS03910 F4V73_RS03910 Morganella psychrotolerans - Cu(+)/Ag(+) sensor histidine kinase
F4V73_RS04495 F4V73_RS04495 Morganella psychrotolerans - ATP-binding protein

Distribution of group_646 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_646 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_646

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_646.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 kdpD 5
2 - 2

Product

# Product Occurence
1 K+-sensing histidine kinase KdpD 5
2 Cu(+)/Ag(+) sensor histidine kinase 1
3 ATP-binding protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0642 6 T Signal transduction mechanisms (T) Signal transduction histidine kinase
COG5002 1 T Signal transduction mechanisms (T) Sensor histidine kinase WalK

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07644 1 two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] Two-component system Imipenem resistance, repression of porin OprD

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00512 7 His Kinase A (phospho-acceptor) domain
PF00672 2 HAMP domain
PF02518 7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
PF21085 1 CusS sensor domain

Annotations of the 396 SwissProt hits

Annotation Number of occurrences
Adaptive-response sensory kinase SasA 22
Adaptive-response sensory-kinase SasA 1
Aerobic respiration control sensor protein ArcB 3
Aerobic respiration control sensor protein ArcB homolog 1
Alginate biosynthesis sensor protein KinB 1
Alkaline phosphatase synthesis sensor protein PhoR 1
Autoinducer 2 sensor kinase/phosphatase LuxQ 5
Bacteriophytochrome 2
C4-dicarboxylate transport sensor protein DctB 2
C4-dicarboxylate transport sensor protein DctS 1
CAI-1 autoinducer sensor kinase/phosphatase CqsS 2
Cell-division control histidine kinase PdhS 9
Circadian input-output histidine kinase CikA 3
Cyanobacterial phytochrome A 1
Cyanobacterial phytochrome B 1
Drug sensory protein A 1
Ethylene receptor 4
Ethylene receptor 1 6
Ethylene receptor 2 2
Ethylene response sensor 1 1
Globin-coupled histidine kinase 1
Heme sensor protein HssS 18
Histidine kinase 1 1
Histidine kinase 2 1
Histidine kinase 3 1
Histidine kinase 5 1
Histidine kinase CKI1 1
Histidine kinase P4 1
Histidine protein kinase 1 1
Histidine protein kinase DivJ 1
Histidine protein kinase NIK1 1
Histidine protein kinase SLN1 1
Histidine protein kinase SaeS 12
Hybrid signal transduction histidine kinase A 1
Hybrid signal transduction histidine kinase B 1
Hybrid signal transduction histidine kinase C 1
Hybrid signal transduction histidine kinase D 1
Hybrid signal transduction histidine kinase E 1
Hybrid signal transduction histidine kinase F 1
Hybrid signal transduction histidine kinase G 1
Hybrid signal transduction histidine kinase H 1
Hybrid signal transduction histidine kinase J 1
Hybrid signal transduction histidine kinase K 1
Hybrid signal transduction histidine kinase L 1
Hybrid signal transduction protein dokA 1
Methanogenesis regulatory histidine kinase FilI 1
Methyl sulfide methyltransferase-associated sensor 1
Nisin biosynthesis sensor protein NisK 1
Nitrogen fixation regulatory protein 1
Non-motile and phage-resistance protein 1
Osmosensing histidine protein kinase SLN1 1
Peroxide stress-activated histidine kinase mak1 1
Peroxide stress-activated histidine kinase mak2 1
Phosphate regulon sensor protein PhoR 5
Phytochrome 1
Phytochrome B 5
Phytochrome B1 1
Phytochrome-like protein Cph1 1
Probable C4-dicarboxylate sensor kinase 1
Probable ethylene response sensor 1 2
Probable ethylene response sensor 2 2
Probable histidine kinase 1 2
Probable histidine kinase 3 2
Probable histidine kinase 5 1
Probable sensor histidine kinase HK 1
Probable sensor histidine kinase TcrY 1
Probable sensor kinase SilS 1
Probable sensor protein PcoS 1
Putative sensor histidine kinase NtrY-like 5
Putative sensor protein Sfri_3689 1
Sensor histidine kinase ArsS 1
Sensor histidine kinase AruS 1
Sensor histidine kinase AtsR 1
Sensor histidine kinase CpxA 2
Sensor histidine kinase CssS 1
Sensor histidine kinase CusS 3
Sensor histidine kinase EnvZ 6
Sensor histidine kinase FlgS 1
Sensor histidine kinase GacS 1
Sensor histidine kinase GlrK 1
Sensor histidine kinase GraS 7
Sensor histidine kinase GtrS 1
Sensor histidine kinase Hik2 2
Sensor histidine kinase HprS 1
Sensor histidine kinase KdpD 1
Sensor histidine kinase MtrB 6
Sensor histidine kinase PmrB 1
Sensor histidine kinase QseE 1
Sensor histidine kinase RcsC 4
Sensor histidine kinase ResE 1
Sensor histidine kinase RppB 1
Sensor histidine kinase SpaK 1
Sensor histidine kinase SsrA 1
Sensor histidine kinase TmoS 1
Sensor histidine kinase TodS 2
Sensor histidine kinase TrcS 1
Sensor histidine kinase VxrA 1
Sensor histidine kinase WalK 1
Sensor histidine kinase YcbM 1
Sensor histidine kinase YclK 1
Sensor histidine kinase YkoH 1
Sensor histidine kinase YrkQ 1
Sensor histidine kinase YvcQ 1
Sensor histidine kinase YvrG 1
Sensor histidine kinase YxdK 1
Sensor histidine kinase ZraS 5
Sensor histidine protein kinase HK06 2
Sensor histidine protein kinase/phosphatase WalK 2
Sensor protein BasS 2
Sensor protein ChvG 2
Sensor protein CiaH 2
Sensor protein CopS 1
Sensor protein CpxA 2
Sensor protein CreC 1
Sensor protein CseC 2
Sensor protein CutS 2
Sensor protein CzcS 1
Sensor protein DegM 1
Sensor protein DivL 1
Sensor protein DltS 2
Sensor protein EvgS 2
Sensor protein FixL 3
Sensor protein GacS 1
Sensor protein GtcS 1
Sensor protein IrlS 2
Sensor protein KdpD 5
Sensor protein PfeS 1
Sensor protein PhoQ 3
Sensor protein QseC 5
Sensor protein RprX 1
Sensor protein RstB 1
Sensor protein SphS 1
Sensor protein SrrB 8
Sensor protein TorS 2
Sensor protein VanS 1
Sensor protein VanSB 1
Sensor protein kinase CarS 1
Sensor protein kinase GraS 11
Sensor protein kinase PilS 1
Sensor protein kinase PmrB 1
Sensor protein kinase WalK 18
Sensor protein kinase WalK (Fragment) 2
Sensor-like histidine kinase SenX3 5
Sensor-type histidine kinase PrrB 4
Sensory histidine kinase/phosphatase NtrB 6
Sensory/regulatory protein RpfC 2
Signal transduction histidine-protein kinase AfsQ2 1
Signal transduction histidine-protein kinase ArlS 13
Signal transduction histidine-protein kinase AtoS 1
Signal transduction histidine-protein kinase BaeS 1
Signal transduction histidine-protein kinase BarA 4
Signal transduction histidine-protein kinase/phosphatase MprB 14
Sporulation kinase A 1
Sporulation kinase B 1
Sporulation kinase C 1
Sporulation kinase D 1
Sporulation kinase E 1
Swarming motility regulation sensor protein RssA 1
Tetrathionate sensor histidine kinase TtrS 1
Two-component sensor PhoQ 1
Two-component system protein A 1
Uncharacterized sensor-like histidine kinase R01002 1
Uncharacterized sensor-like histidine kinase ycf26 2
Virulence sensor histidine kinase PhoQ 7
Virulence sensor protein BvgS 3
Virulence sensor protein PhoQ 1

Protein length

Min length 445
Max length 465
Mean length (sd) 457.1 (6.0)
Median length 458.0

Protein length distribution