Orthogroup:group_2454



Homologs in group_2454

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7 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
PMI_RS05695 PMI_RS05695 Proteus mirabilis HI4320 - methyl-accepting chemotaxis protein
PMI_RS08130 PMI_RS08130 Proteus mirabilis HI4320 - methyl-accepting chemotaxis protein
PMI_RS08135 PMI_RS08135 Proteus mirabilis HI4320 - methyl-accepting chemotaxis protein
PMI_RS11775 PMI_RS11775 Proteus mirabilis HI4320 - methyl-accepting chemotaxis protein
PMI_RS11780 PMI_RS11780 Proteus mirabilis HI4320 - methyl-accepting chemotaxis protein
PMI_RS13870 PMI_RS13870 Proteus mirabilis HI4320 - methyl-accepting chemotaxis protein
PMI_RS13875 PMI_RS13875 Proteus mirabilis HI4320 - methyl-accepting chemotaxis protein

Distribution of group_2454 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2454 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2454

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2454.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 7

Product

# Product Occurence
1 methyl-accepting chemotaxis protein 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0840 7 T Signal transduction mechanisms (T) Methyl-accepting chemotaxis protein (MCP)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03406 5 methyl-accepting chemotaxis protein Two-component system
Bacterial chemotaxis
-
K05874 1 methyl-accepting chemotaxis protein I, serine sensor receptor Two-component system
Bacterial chemotaxis
-
K05877 1 methyl-accepting chemotaxis protein IV, peptide sensor receptor Two-component system
Bacterial chemotaxis
-

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00015 7 Methyl-accepting chemotaxis protein (MCP) signalling domain
PF00672 6 HAMP domain
PF02203 4 Tar ligand binding domain homologue

Annotations of the 89 SwissProt hits

Annotation Number of occurrences
Aerotaxis receptor 1
Biofilm dispersion protein BdlA 1
Chemoreceptor McpA 1
Chemoreceptor protein A 1
Frizzy aggregation protein FrzCD 1
Halobacterial transducer protein 9 1
Heme-based aerotactic transducer HemAT 2
Laminin subunit beta-1 1
Methyl-accepting chemotaxis aspartate transducer 1
Methyl-accepting chemotaxis citrate transducer 1
Methyl-accepting chemotaxis protein 1 1
Methyl-accepting chemotaxis protein 2 1
Methyl-accepting chemotaxis protein 3 1
Methyl-accepting chemotaxis protein 4 1
Methyl-accepting chemotaxis protein Aer 1
Methyl-accepting chemotaxis protein Amb0994 1
Methyl-accepting chemotaxis protein Amb2333 1
Methyl-accepting chemotaxis protein CtpH 1
Methyl-accepting chemotaxis protein CtpL 1
Methyl-accepting chemotaxis protein CtpM 1
Methyl-accepting chemotaxis protein HlyB 1
Methyl-accepting chemotaxis protein I 1
Methyl-accepting chemotaxis protein II 2
Methyl-accepting chemotaxis protein III 1
Methyl-accepting chemotaxis protein IV 1
Methyl-accepting chemotaxis protein McpA 3
Methyl-accepting chemotaxis protein McpB 2
Methyl-accepting chemotaxis protein McpC 1
Methyl-accepting chemotaxis protein McpG 1
Methyl-accepting chemotaxis protein McpH 1
Methyl-accepting chemotaxis protein McpK 1
Methyl-accepting chemotaxis protein McpN 1
Methyl-accepting chemotaxis protein McpP 1
Methyl-accepting chemotaxis protein McpQ 1
Methyl-accepting chemotaxis protein McpS 1
Methyl-accepting chemotaxis protein McpU 1
Methyl-accepting chemotaxis protein NahY 1
Methyl-accepting chemotaxis protein PcaY 2
Methyl-accepting chemotaxis protein PctA 1
Methyl-accepting chemotaxis protein PctB 1
Methyl-accepting chemotaxis protein PctC 1
Methyl-accepting chemotaxis protein PscA 1
Methyl-accepting chemotaxis protein TlpA 1
Methyl-accepting chemotaxis protein TlpB 1
Methyl-accepting chemotaxis protein TlpC 1
Methyl-accepting chemotaxis protein TlpQ 1
Methyl-accepting chemotaxis serine transducer 1
Probable chemoreceptor McpE 1
Probable chemoreceptor y4fA 1
Probable chemoreceptor y4sI 1
Probable methyl-accepting chemotaxis protein BT9727_0355 1
Probable methyl-accepting chemotaxis protein BT9727_0469 1
Protein PilJ 1
Putative methyl-accepting chemotaxis AlkN 2
Putative methyl-accepting chemotaxis protein YoaH 1
Putative methyl-accepting chemotaxis protein sll0041 1
Putative sensory transducer protein 1
Putative sensory transducer protein YfmS 1
Putative sensory transducer protein YvaQ 1
Sensory rhodopsin I transducer 3
Sensory rhodopsin II transducer 4
Sensory rhodopsin II transducer (Fragment) 1
Toxin coregulated pilus biosynthesis protein I 2
Transducer protein BasT 1
Transducer protein Car 1
Transducer protein CosT 2
Transducer protein Htr13 1
Transducer protein Htr18 1
Transducer protein Htr4 2
Transducer protein Htr6 1
Transducer protein Htr7 2
Transducer protein Htr8 1
Transducer protein MpcT 1

Protein length

Min length 506
Max length 575
Mean length (sd) 542.7 (27.6)
Median length 548.0

Protein length distribution