PF00266


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00266, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 29 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00266
Description Aminotransferase class-V

Occurence in the database

PF00266 is associated with 29 different proteins (see tab "Protein list" and "Profile")
The 29 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_526 FBDBKF_01135 210746 211960 -1 iscS IscS subfamily cysteine desulfurase Morganella morganii S1
1 group_278 FBDBKF_05810 164123 165361 -1 sufS cysteine desulfurase SufS Morganella morganii S1
2 group_1076 FBDBKF_06105 44494 45705 1 csdA cysteine desulfurase CsdA Morganella morganii S1
3 group_1226 FBDBKF_07145 100742 101827 1 serC 3-phosphoserine/phosphohydroxythreonine transaminase Morganella morganii S1
4 group_526 EHELCC_00410 96908 98122 1 iscS IscS subfamily cysteine desulfurase Morganella morganii S2
5 group_1226 EHELCC_03825 84359 85444 -1 serC 3-phosphoserine/phosphohydroxythreonine transaminase Morganella morganii S2
6 group_1076 EHELCC_09150 45066 46277 1 csdA cysteine desulfurase CsdA Morganella morganii S2
7 group_278 EHELCC_11780 16133 17371 1 sufS cysteine desulfurase SufS Morganella morganii S2
8 group_526 NLDBIP_03050 582014 583228 -1 iscS IscS subfamily cysteine desulfurase Morganella morganii S4
9 group_1226 NLDBIP_03825 84155 85240 -1 serC 3-phosphoserine/phosphohydroxythreonine transaminase Morganella morganii S4
10 group_1076 NLDBIP_09530 45066 46277 1 csdA cysteine desulfurase CsdA Morganella morganii S4
11 group_278 NLDBIP_12120 16088 17326 1 sufS cysteine desulfurase SufS Morganella morganii S4
12 group_526 LHKJJB_04565 189255 190469 -1 iscS IscS subfamily cysteine desulfurase Morganella morganii S3
13 group_1076 LHKJJB_08225 170961 172172 -1 csdA cysteine desulfurase CsdA Morganella morganii S3
14 group_1226 LHKJJB_09655 84269 85354 -1 serC 3-phosphoserine/phosphohydroxythreonine transaminase Morganella morganii S3
15 group_278 LHKJJB_11980 16133 17371 1 sufS cysteine desulfurase SufS Morganella morganii S3
16 group_526 HKOGLL_02480 97113 98327 1 iscS IscS subfamily cysteine desulfurase Morganella morganii S5
17 group_1076 HKOGLL_07775 170961 172172 -1 csdA cysteine desulfurase CsdA Morganella morganii S5
18 group_1226 HKOGLL_09320 105698 106783 1 serC 3-phosphoserine/phosphohydroxythreonine transaminase Morganella morganii S5
19 group_278 HKOGLL_10595 16133 17371 1 sufS cysteine desulfurase SufS Morganella morganii S5
20 group_1226 F4V73_RS01330 288578 289663 1 serC 3-phosphoserine/phosphohydroxythreonine transaminase Morganella psychrotolerans
21 group_278 F4V73_RS03515 752107 753345 1 sufS cysteine desulfurase SufS Morganella psychrotolerans
22 group_526 F4V73_RS07205 1498764 1499978 -1 IscS subfamily cysteine desulfurase Morganella psychrotolerans
23 group_1076 F4V73_RS15810 168701 169909 -1 csdA cysteine desulfurase CsdA Morganella psychrotolerans
24 group_278 F4V73_RS16875 204456 205751 -1 aminotransferase class V-fold PLP-dependent enzyme Morganella psychrotolerans
25 group_1226 PMI_RS03500 779999 781087 1 serC 3-phosphoserine/phosphohydroxythreonine transaminase Proteus mirabilis HI4320
26 group_278 PMI_RS06830 1490568 1491809 -1 sufS cysteine desulfurase SufS Proteus mirabilis HI4320
27 group_526 PMI_RS09180 2000841 2002055 -1 IscS subfamily cysteine desulfurase Proteus mirabilis HI4320
28 group_1076 PMI_RS11370 2502339 2503553 1 csdA cysteine desulfurase CsdA Proteus mirabilis HI4320