Orthogroup:group_438


Homologs in group_438

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06105 FBDBKF_06105 Morganella morganii S1 csdA cysteine desulfurase CsdA
EHELCC_09150 EHELCC_09150 Morganella morganii S2 csdA cysteine desulfurase CsdA
NLDBIP_09530 NLDBIP_09530 Morganella morganii S4 csdA cysteine desulfurase CsdA
LHKJJB_08225 LHKJJB_08225 Morganella morganii S3 csdA cysteine desulfurase CsdA
HKOGLL_07775 HKOGLL_07775 Morganella morganii S5 csdA cysteine desulfurase CsdA
F4V73_RS15810 F4V73_RS15810 Morganella psychrotolerans csdA cysteine desulfurase CsdA
PMI_RS11370 PMI_RS11370 Proteus mirabilis HI4320 csdA cysteine desulfurase CsdA

Distribution of group_438 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_438 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_438

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_438.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 csdA 7

Product

# Product Occurence
1 cysteine desulfurase CsdA 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0520 7 E Amino acid transport and metabolism (E) Selenocysteine lyase/Cysteine desulfurase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01766 7 cysteine sulfinate desulfinase [EC:4.4.1.-] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00266 7 Aminotransferase class-V

Annotations of the 345 SwissProt hits

Annotation Number of occurrences
2-aminoethylphosphonate--pyruvate transaminase 1
Aminotransferase-like protein FGM3 1
Capreomycidine synthase 1
Cysteine desulfurase 76
Cysteine desulfurase 1 1
Cysteine desulfurase 1, chloroplastic 1
Cysteine desulfurase 2 1
Cysteine desulfurase CsdA 1
Cysteine desulfurase IscS 161
Cysteine desulfurase IscS 1 1
Cysteine desulfurase IscS 2 1
Cysteine desulfurase NifS 1
Cysteine desulfurase SufS 3
Cysteine desulfurase, mitochondrial 7
Cysteine desulfurase, mitosomal 2
Cysteine desulfurase-like protein ustD 1
Histidinol-phosphate aminotransferase 5
IscS-like cysteine desulfurase 1
Iscs-like cysteine desulfurase 1
Isopenicillin N epimerase 2
Kynureninase 1
Kynureninase 2 1
Molybdenum cofactor sulfurase 10
Molybdenum cofactor sulfurase 2 1
NifS/IcsS protein homolog 1
Nonribosomal peptide synthetase-like enzyme fsqF 1
Probable cysteine desulfurase 35
Probable cysteine desulfurase 1 1
Probable cysteine desulfurase 2 1
Probable cysteine desulfurase, mitochondrial 2
Probable glycine dehydrogenase (decarboxylating) subunit 2 1
Probable hercynylcysteine sulfoxide lyase 1
Putative csd-like protein HI_1343 1
Putative cysteine desulfurase IscS 1 1
Putative cysteine desulfurase IscS 2 1
Putative cysteine desulfurase NifS 2
Putative cysteine desulfurase PbSufS 1
Selenocysteine lyase 6
Serine hydroxymethyltransferase 1
Serine hydroxymethyltransferase 2 2
Uncharacterized aminotransferase C777.03c 1
Uncharacterized aminotransferase YcbU 1
Uncharacterized protein C11D3.10 1
Uncharacterized protein MT3887 1
Uncharacterized protein Rv3778c 1

Protein length

Min length 402
Max length 404
Mean length (sd) 403.0 (0.6)
Median length 403.0

Protein length distribution