Orthogroup:group_212


Homologs in group_212

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9 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13730 FBDBKF_13730 Morganella morganii S1 - MFS transporter
EHELCC_11400 EHELCC_11400 Morganella morganii S2 - MFS transporter
NLDBIP_11745 NLDBIP_11745 Morganella morganii S4 - MFS transporter
LHKJJB_11605 LHKJJB_11605 Morganella morganii S3 - MFS transporter
HKOGLL_10215 HKOGLL_10215 Morganella morganii S5 - MFS transporter
F4V73_RS12600 F4V73_RS12600 Morganella psychrotolerans - nucleoside permease
PMI_RS04170 PMI_RS04170 Proteus mirabilis HI4320 - MFS transporter
PMI_RS07650 PMI_RS07650 Proteus mirabilis HI4320 - MFS transporter
PMI_RS14680 PMI_RS14680 Proteus mirabilis HI4320 - MFS transporter

Distribution of group_212 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_212 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_212

Orthogroup content: 9 members

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This page summarizes the annotation of all members of the orthologous group group_212.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 9

Product

# Product Occurence
1 MFS transporter 8
2 nucleoside permease 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2211 1 G Carbohydrate transport and metabolism (G) Na+/melibiose symporter or related transporter
COG2223 1 P Inorganic ion transport and metabolism (P) Nitrate/nitrite transporter NarK
COG2814 7 G Carbohydrate transport and metabolism (G) Predicted arabinose efflux permease AraJ, MFS family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02532 1 MFS transporter, OHS family, lactose permease - -
K11537 6 MFS transporter, NHS family, xanthosine permease - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01306 1 LacY proton/sugar symporter
PF03825 8 Nucleoside H+ symporter

Annotations of the 14 SwissProt hits

Annotation Number of occurrences
Inner membrane protein YqcE 1
Lactose permease 3
Lactose permease (Fragment) 1
Maltose permease 1
Melibiose permease 1
Nucleoside permease NupG 2
Putative nucleoside transporter YegT 1
Raffinose permease 1
Sucrose permease 1
Uncharacterized transporter YwbF 1
Xanthosine permease 1

Protein length

Min length 414
Max length 420
Mean length (sd) 416.7 (1.7)
Median length 417.0

Protein length distribution