K18476


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K18476, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K18476
KO K18476
Description TetR/AcrR family transcriptional regulator, tetracycline repressor protein

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K18476 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3669 PMI_RS11865 2620845 2621468 -1 tetR(J) tetracycline resistance transcriptional repressor TetR(J) Proteus mirabilis HI4320
1 group_3669 PMI_RS15255 3384931 3385569 -1 TetR/AcrR family transcriptional regulator C-terminal domain-containing protein Proteus mirabilis HI4320
2 group_2583 FBDBKF_02875 269881 270459 1 tetR TetR family transcriptional regulator Morganella morganii S1
3 group_2583 EHELCC_03345 657701 658279 1 tetR TetR family transcriptional regulator Morganella morganii S2
4 group_2583 NLDBIP_00115 21857 22435 -1 tetR TetR family transcriptional regulator Morganella morganii S4
5 group_2583 LHKJJB_01920 370250 370828 1 tetR TetR family transcriptional regulator Morganella morganii S3
6 group_2583 HKOGLL_01960 375761 376339 1 tetR TetR family transcriptional regulator Morganella morganii S5
7 group_3669 FBDBKF_20470 2618 2935 1 HTH tetR-type domain-containing protein Morganella morganii S1