Orthogroup:group_3743


Homologs in group_3743

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2 homologs were identified in 2 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_20470 FBDBKF_20470 Morganella morganii S1 - HTH tetR-type domain-containing protein
PMI_RS11865 PMI_RS11865 Proteus mirabilis HI4320 tetR(J) tetracycline resistance transcriptional repressor TetR(J)

Distribution of group_3743 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of the RefSeq best hits of group_3743

Orthogroup content: 2 members

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This page summarizes the annotation of all members of the orthologous group group_3743.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 1
2 tetR(J) 1

Product

# Product Occurence
1 HTH tetR-type domain-containing protein 1
2 tetracycline resistance transcriptional repressor TetR(J) 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1309 2 K Transcription (K) DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K18476 2 TetR/AcrR family transcriptional regulator, tetracycline repressor protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00440 2 Bacterial regulatory proteins, tetR family
PF02909 2 Tetracyclin repressor-like, C-terminal domain

Annotations of the 30 SwissProt hits

Annotation Number of occurrences
Biofilm operon icaADBC HTH-type negative transcriptional regulator IcaR 10
HTH-type transcriptional regulator MtrR 1
HTH-type transcriptional regulator UidR 4
HTH-type transcriptional repressor MT1396 1
HTH-type transcriptional repressor Rv1353c 1
Tetracycline repressor protein class A from transposon 1721 1
Tetracycline repressor protein class B from transposon Tn10 1
Tetracycline repressor protein class C 1
Tetracycline repressor protein class D 2
Tetracycline repressor protein class E 1
Tetracycline repressor protein class G 1
Tetracycline repressor protein class H 2
Uncharacterized HTH-type transcriptional regulator Mb1388c 1
Uncharacterized HTH-type transcriptional regulator Rv0681 1
Uncharacterized HTH-type transcriptional regulator YobS 1
Uncharacterized HTH-type transcriptional regulator YvkB 1

Protein length

Min length 105
Max length 207
Mean length (sd) 156.0 (72.1)
Median length 156.0

Protein length distribution