COG5295


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG5295, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 16 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Autotransporter adhesin
Function(s) descr. Intracellular trafficking, secretion, and vesicular transport (U)
Extracellular structures (W)

Occurence in the database

COG5295 is associated with 16 different proteins (see tab "Protein list" and "Profile")
The 16 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_178 FBDBKF_03960 189041 191266 -1 taaP trimeric autotransporter adhesin TaaP Morganella morganii S1
1 group_81 FBDBKF_06415 118169 119443 -1 smc Chromosome segregation ATPase Smc Morganella morganii S1
2 group_178 EHELCC_06575 55837 58062 1 taaP trimeric autotransporter adhesin TaaP Morganella morganii S2
3 group_81 EHELCC_09460 118741 120015 -1 smc Chromosome segregation ATPase Smc Morganella morganii S2
4 group_178 NLDBIP_06900 55710 57935 1 taaP trimeric autotransporter adhesin TaaP Morganella morganii S4
5 group_81 NLDBIP_09840 118741 120015 -1 smc Chromosome segregation ATPase Smc Morganella morganii S4
6 group_178 LHKJJB_06435 19456 21681 1 taaP trimeric autotransporter adhesin TaaP Morganella morganii S3
7 group_81 LHKJJB_07915 97223 98497 1 smc Chromosome segregation ATPase Smc Morganella morganii S3
8 group_178 HKOGLL_04495 211706 213931 -1 taaP trimeric autotransporter adhesin TaaP Morganella morganii S5
9 group_81 HKOGLL_07465 97223 98497 1 smc Chromosome segregation ATPase Smc Morganella morganii S5
10 group_178 F4V73_RS10220 153914 154744 -1 YadA-like family protein Morganella psychrotolerans
11 group_178 F4V73_RS14140 41434 42516 -1 YadA-like family protein Morganella psychrotolerans
12 group_81 F4V73_RS19530 94358 95629 1 YadA C-terminal domain-containing protein Morganella psychrotolerans
13 group_178 PMI_RS10460 2297251 2298006 1 aipA trimeric autotransporter adhesin AipA Proteus mirabilis HI4320
14 group_81 PMI_RS10715 2356612 2358264 1 YadA-like family protein Proteus mirabilis HI4320
15 group_178 PMI_RS12715 2811965 2814190 -1 taaP trimeric autotransporter adhesin TaaP Proteus mirabilis HI4320