COG1129

Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected COG entry COG1129
Protein list: lists the 31 occurences of the COG entry within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the COG entry of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entry has been clustered.
Orthogroups are shown in red if they are annotated with that particular COG entry in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and COG entry prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entry.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entry prediction.

Description

Description ABC-type sugar transport system, ATPase component
Function(s) descr. Carbohydrate transport and metabolism (G)

Occurence in the database

COG1129 is associated with 31 different proteins
The 31 proteins are classified into 3 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2534 FBDBKF_01855 58153 59658 -1 ccmA heme ABC exporter ATP-binding protein CcmA Morganella morganii S1
1 group_2550 FBDBKF_02190 126811 128373 -1 lsrA autoinducer 2 ABC transporter ATP-binding protein LsrA Morganella morganii S1
2 group_11 FBDBKF_04505 95783 97291 1 mglA galactose/methyl galactoside ABC transporter ATP-binding protein MglA Morganella morganii S1
3 group_11 FBDBKF_04700 142239 143738 1 xylG ABC-type sugar transport system, ATPase component Morganella morganii S1
4 group_11 FBDBKF_15410 7126 8631 -1 rbsA ribose ABC transporter ATP-binding protein RbsA Morganella morganii S1
5 group_2534 EHELCC_02325 445973 447478 -1 ccmA heme ABC exporter ATP-binding protein CcmA Morganella morganii S2
6 group_2550 EHELCC_02660 514631 516193 -1 lsrA autoinducer 2 ABC transporter ATP-binding protein LsrA Morganella morganii S2
7 group_11 EHELCC_05795 155240 156748 1 mglA galactose/methyl galactoside ABC transporter ATP-binding protein MglA Morganella morganii S2
8 group_11 EHELCC_05990 201696 203195 1 xylG ABC-type sugar transport system, ATPase component Morganella morganii S2
9 group_11 EHELCC_15770 6426 7931 -1 rbsA ribose ABC transporter ATP-binding protein RbsA Morganella morganii S2
10 group_2550 NLDBIP_00800 163943 165505 1 lsrA autoinducer 2 ABC transporter ATP-binding protein LsrA Morganella morganii S4
11 group_2534 NLDBIP_01135 232658 234163 1 ccmA heme ABC exporter ATP-binding protein CcmA Morganella morganii S4
12 group_11 NLDBIP_06115 196305 197813 1 mglA galactose/methyl galactoside ABC transporter ATP-binding protein MglA Morganella morganii S4
13 group_11 NLDBIP_06310 242761 244260 1 xylG ABC-type sugar transport system, ATPase component Morganella morganii S4
14 group_11 NLDBIP_16600 72732 74237 1 rbsA ribose ABC transporter ATP-binding protein RbsA Morganella morganii S4
15 group_2534 LHKJJB_00900 158522 160027 -1 ccmA heme ABC exporter ATP-binding protein CcmA Morganella morganii S3
16 group_2550 LHKJJB_01235 227180 228742 -1 lsrA autoinducer 2 ABC transporter ATP-binding protein LsrA Morganella morganii S3
17 group_11 LHKJJB_02995 173829 175337 1 mglA galactose/methyl galactoside ABC transporter ATP-binding protein MglA Morganella morganii S3
18 group_11 LHKJJB_03190 220285 221784 1 xylG ABC-type sugar transport system, ATPase component Morganella morganii S3
19 group_11 LHKJJB_16205 6426 7931 -1 rbsA ribose ABC transporter ATP-binding protein RbsA Morganella morganii S3
20 group_2534 HKOGLL_00940 164033 165538 -1 ccmA heme ABC exporter ATP-binding protein CcmA Morganella morganii S5
21 group_2550 HKOGLL_01275 232691 234253 -1 lsrA autoinducer 2 ABC transporter ATP-binding protein LsrA Morganella morganii S5
22 group_11 HKOGLL_06470 95693 97201 1 mglA galactose/methyl galactoside ABC transporter ATP-binding protein MglA Morganella morganii S5
23 group_11 HKOGLL_06665 142149 143648 1 xylG ABC-type sugar transport system, ATPase component Morganella morganii S5
24 group_11 HKOGLL_15975 6426 7931 -1 rbsA ribose ABC transporter ATP-binding protein RbsA Morganella morganii S5
25 group_2534 F4V73_RS04200 887997 889490 -1 sugar ABC transporter ATP-binding protein Morganella psychrotolerans
26 group_2550 F4V73_RS04560 963472 965049 -1 lsrA autoinducer 2 ABC transporter ATP-binding protein LsrA Morganella psychrotolerans
27 group_11 F4V73_RS09120 1907432 1908892 1 sugar ABC transporter ATP-binding protein Morganella psychrotolerans
28 group_11 F4V73_RS09175 1920980 1922479 1 sugar ABC transporter ATP-binding protein Morganella psychrotolerans
29 group_11 F4V73_RS17735 188457 189962 1 rbsA ribose ABC transporter ATP-binding protein RbsA Morganella psychrotolerans
30 group_11 PMI_RS00440 118294 119802 -1 rbsA ribose ABC transporter ATP-binding protein RbsA Proteus mirabilis HI4320