COG1129

Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1129, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 31 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description ABC-type sugar transport system, ATPase component
Function(s) descr. Carbohydrate transport and metabolism (G)

Occurence in the database

COG1129 is associated with 31 different proteins (see tab "Protein list" and "Profile")
The 31 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2503 FBDBKF_01855 58153 59658 -1 ccmA heme ABC exporter ATP-binding protein CcmA Morganella morganii S1
1 group_2520 FBDBKF_02190 126811 128373 -1 lsrA autoinducer 2 ABC transporter ATP-binding protein LsrA Morganella morganii S1
2 group_16 FBDBKF_04505 95783 97291 1 mglA galactose/methyl galactoside ABC transporter ATP-binding protein MglA Morganella morganii S1
3 group_16 FBDBKF_04700 142239 143738 1 xylG ABC-type sugar transport system, ATPase component Morganella morganii S1
4 group_16 FBDBKF_15410 7126 8631 -1 rbsA ribose ABC transporter ATP-binding protein RbsA Morganella morganii S1
5 group_2503 EHELCC_02325 445973 447478 -1 ccmA heme ABC exporter ATP-binding protein CcmA Morganella morganii S2
6 group_2520 EHELCC_02660 514631 516193 -1 lsrA autoinducer 2 ABC transporter ATP-binding protein LsrA Morganella morganii S2
7 group_16 EHELCC_05795 155240 156748 1 mglA galactose/methyl galactoside ABC transporter ATP-binding protein MglA Morganella morganii S2
8 group_16 EHELCC_05990 201696 203195 1 xylG ABC-type sugar transport system, ATPase component Morganella morganii S2
9 group_16 EHELCC_15770 6426 7931 -1 rbsA ribose ABC transporter ATP-binding protein RbsA Morganella morganii S2
10 group_2520 NLDBIP_00800 163943 165505 1 lsrA autoinducer 2 ABC transporter ATP-binding protein LsrA Morganella morganii S4
11 group_2503 NLDBIP_01135 232658 234163 1 ccmA heme ABC exporter ATP-binding protein CcmA Morganella morganii S4
12 group_16 NLDBIP_06115 196305 197813 1 mglA galactose/methyl galactoside ABC transporter ATP-binding protein MglA Morganella morganii S4
13 group_16 NLDBIP_06310 242761 244260 1 xylG ABC-type sugar transport system, ATPase component Morganella morganii S4
14 group_16 NLDBIP_16600 72732 74237 1 rbsA ribose ABC transporter ATP-binding protein RbsA Morganella morganii S4
15 group_2503 LHKJJB_00900 158522 160027 -1 ccmA heme ABC exporter ATP-binding protein CcmA Morganella morganii S3
16 group_2520 LHKJJB_01235 227180 228742 -1 lsrA autoinducer 2 ABC transporter ATP-binding protein LsrA Morganella morganii S3
17 group_16 LHKJJB_02995 173829 175337 1 mglA galactose/methyl galactoside ABC transporter ATP-binding protein MglA Morganella morganii S3
18 group_16 LHKJJB_03190 220285 221784 1 xylG ABC-type sugar transport system, ATPase component Morganella morganii S3
19 group_16 LHKJJB_16205 6426 7931 -1 rbsA ribose ABC transporter ATP-binding protein RbsA Morganella morganii S3
20 group_2503 HKOGLL_00940 164033 165538 -1 ccmA heme ABC exporter ATP-binding protein CcmA Morganella morganii S5
21 group_2520 HKOGLL_01275 232691 234253 -1 lsrA autoinducer 2 ABC transporter ATP-binding protein LsrA Morganella morganii S5
22 group_16 HKOGLL_06470 95693 97201 1 mglA galactose/methyl galactoside ABC transporter ATP-binding protein MglA Morganella morganii S5
23 group_16 HKOGLL_06665 142149 143648 1 xylG ABC-type sugar transport system, ATPase component Morganella morganii S5
24 group_16 HKOGLL_15975 6426 7931 -1 rbsA ribose ABC transporter ATP-binding protein RbsA Morganella morganii S5
25 group_2503 F4V73_RS04200 887997 889490 -1 sugar ABC transporter ATP-binding protein Morganella psychrotolerans
26 group_2520 F4V73_RS04560 963472 965049 -1 lsrA autoinducer 2 ABC transporter ATP-binding protein LsrA Morganella psychrotolerans
27 group_16 F4V73_RS09120 1907432 1908892 1 sugar ABC transporter ATP-binding protein Morganella psychrotolerans
28 group_16 F4V73_RS09175 1920980 1922479 1 sugar ABC transporter ATP-binding protein Morganella psychrotolerans
29 group_16 F4V73_RS17735 188457 189962 1 rbsA ribose ABC transporter ATP-binding protein RbsA Morganella psychrotolerans
30 group_16 PMI_RS00440 118294 119802 -1 rbsA ribose ABC transporter ATP-binding protein RbsA Proteus mirabilis HI4320