Orthogroup:group_2550


Homologs in group_2550

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_02190 FBDBKF_02190 Morganella morganii S1 lsrA autoinducer 2 ABC transporter ATP-binding protein LsrA
EHELCC_02660 EHELCC_02660 Morganella morganii S2 lsrA autoinducer 2 ABC transporter ATP-binding protein LsrA
NLDBIP_00800 NLDBIP_00800 Morganella morganii S4 lsrA autoinducer 2 ABC transporter ATP-binding protein LsrA
LHKJJB_01235 LHKJJB_01235 Morganella morganii S3 lsrA autoinducer 2 ABC transporter ATP-binding protein LsrA
HKOGLL_01275 HKOGLL_01275 Morganella morganii S5 lsrA autoinducer 2 ABC transporter ATP-binding protein LsrA
F4V73_RS04560 F4V73_RS04560 Morganella psychrotolerans lsrA autoinducer 2 ABC transporter ATP-binding protein LsrA

Distribution of group_2550 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2550 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2550

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2550.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lsrA 6

Product

# Product Occurence
1 autoinducer 2 ABC transporter ATP-binding protein LsrA 6

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1129 6 G Carbohydrate transport and metabolism (G) ABC-type sugar transport system, ATPase component

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K10558 6 AI-2 transport system ATP-binding protein ABC transporters
Quorum sensing		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00005 6 ABC transporter

Annotations of the 532 SwissProt hits

Annotation Number of occurrences
Aliphatic sulfonates import ATP-binding protein SsuB 2
Aliphatic sulfonates import ATP-binding protein SsuB 2 1
Arabinose import ATP-binding protein AraG 30
Arabinose import ATP-binding protein AraG 1 5
Arabinose import ATP-binding protein AraG 2 5
Arginine transport ATP-binding protein ArtM 1
Autoinducer 2 import ATP-binding protein LsrA 28
D-allose import ATP-binding protein AlsA 1
Fe(3+) ions import ATP-binding protein FbpC 29
Fe(3+) ions import ATP-binding protein FbpC 1 3
Fe(3+) ions import ATP-binding protein FbpC 2 3
Fe(3+) ions import ATP-binding protein FbpC 3 1
Fructose import ATP-binding protein FrcA 1
Fructose import ATP-binding protein FruK 1
Galactofuranose transporter ATP-binding protein YtfR 2
Galactose/methyl galactoside import ATP-binding protein MglA 29
Galactose/methyl galactoside import ATP-binding protein MglA 1 1
Galactose/methyl galactoside import ATP-binding protein MglA 2 1
Glucose import ATP-binding protein TsgD13 1
Glutathione import ATP-binding protein GsiA 15
Guanosine import ATP-binding protein NupO 1
High-affinity branched-chain amino acid transport ATP-binding protein BraF 1
High-affinity branched-chain amino acid transport ATP-binding protein LivF 3
High-affinity branched-chain amino acid transport ATP-binding protein LivG 5
L-arabinose transport ATP-binding protein AraG 2
Linearmycin resistance ATP-binding protein LnrL 1
Lipopolysaccharide export system ATP-binding protein LptB 2
Lipoprotein-releasing system ATP-binding protein LolD 1
Methionine import ATP-binding protein MetN 4
Methionine import ATP-binding protein MetN 1 1
Molybdate/tungstate import ATP-binding protein WtpC 2
Molybdenum import ATP-binding protein ModC 5
Multidrug efflux system ATP-binding protein Rv1218c 1
Nod factor export ATP-binding protein I 16
Nucleoside import ATP-binding protein NupA 1
Peptidoglycan transport ATP-binding protein YejF 1
Probable ABC transporter ATP-binding protein AZC_3926 1
Probable anion import ATP-binding protein HVO_1886 1
Probable branched-chain amino acid transport ATP-binding protein LivF 1
Probable branched-chain amino acid transport ATP-binding protein LivG 2
Probable sulfate/thiosulfate import ATP-binding protein CysA 1
Putative 2-aminoethylphosphonate import ATP-binding protein PhnT 4
Putative ABC transporter ATP-binding protein BC_2655 1
Putative ABC transporter ATP-binding protein BL0043 1
Putative ABC transporter ATP-binding protein BT9727_2424 1
Putative ABC transporter ATP-binding protein CPE1583 1
Putative ABC transporter ATP-binding protein CTC_00753 1
Putative ABC transporter ATP-binding protein MA_1418 1
Putative ABC transporter ATP-binding protein MM_2387 1
Putative ABC transporter ATP-binding protein MM_3016 1
Putative ABC transporter ATP-binding protein OB0804 1
Putative ABC transporter ATP-binding protein SMU_1934c 1
Putative ABC transporter ATP-binding protein TDE_0282 1
Putative ABC transporter ATP-binding protein TDE_0906 1
Putative ABC transporter ATP-binding protein VPA1482 1
Putative autoinducer 2 import ATP-binding protein LsrA homolog 1
Putative carbohydrate transport ATP-binding protein MG119 1
Putative carbohydrate transport ATP-binding protein MPN_258 1
Putative phosphonates utilization ATP-binding protein PhnK 1
Putative ribose/galactose/methyl galactoside import ATP-binding protein 12
Putative ribose/galactose/methyl galactoside import ATP-binding protein 1 7
Putative ribose/galactose/methyl galactoside import ATP-binding protein 2 7
Putative ribose/galactose/methyl galactoside import ATP-binding protein 3 4
Putrescine transport ATP-binding protein PotG 1
Ribose import ATP-binding protein RbsA 62
Ribose import ATP-binding protein RbsA 1 17
Ribose import ATP-binding protein RbsA 2 17
Ribose import ATP-binding protein RbsA 3 4
Ribosome-associated ATPase 1
Spermidine/putrescine import ATP-binding protein PotA 106
Spermidine/putrescine import ATP-binding protein PotA 1 1
Spermidine/putrescine import ATP-binding protein PotA 2 1
Sulfate/thiosulfate import ATP-binding protein CysA 14
Sulfate/thiosulfate import ATP-binding protein CysA (Fragment) 1
Sulfate/thiosulfate import ATP-binding protein CysA 2 1
Thiamine import ATP-binding protein ThiQ 4
Uncharacterized ABC transporter ATP-binding protein R00382 1
Uncharacterized ABC transporter ATP-binding protein YejF 1
Uncharacterized ABC transporter ATP-binding protein YphE 1
Uncharacterized ABC transporter ATP-binding protein y4mK 1
Xylose import ATP-binding protein XylG 33
Xylose/arabinose import ATP-binding protein XylG 1

Protein length

Min length 520
Max length 525
Mean length (sd) 520.8 (2.0)
Median length 520.0

Protein length distribution