COG1122
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1122, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries
within the database. 15 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.
Description
Description | Energy-coupling factor transporter ATP-binding protein EcfA2 |
---|---|
Function(s) descr. | Inorganic ion transport and metabolism (P) General function prediction only (R) |
Occurence in the database
COG1122 is associated with 15 different proteins (see tab "Protein list" and "Profile") |
The 15 proteins are classified into 5 different orthogroup(s) |
# | Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism |
---|---|---|---|---|---|---|---|---|
0 | group_2852 | FBDBKF_10825 | 133653 | 134063 | -1 | cbiO | Cobalt import ATP-binding protein CbiO | Morganella morganii S1 |
1 | group_3078 | FBDBKF_18840 | 14606 | 15454 | -1 | ecfA2 | Energy-coupling factor transporter ATP-binding protein EcfA2 | Morganella morganii S1 |
2 | group_3078 | EHELCC_17035 | 14607 | 15455 | -1 | ecfA2 | Energy-coupling factor transporter ATP-binding protein EcfA2 | Morganella morganii S2 |
3 | group_2852 | EHELCC_19415 | 4439 | 5083 | -1 | ecfA2 | Energy-coupling factor transporter ATP-binding protein EcfA2 | Morganella morganii S2 |
4 | group_2852 | NLDBIP_14990 | 133643 | 134053 | -1 | cbiO | Cobalt import ATP-binding protein CbiO | Morganella morganii S4 |
5 | group_3078 | NLDBIP_18415 | 14606 | 15454 | -1 | ecfA2 | Energy-coupling factor transporter ATP-binding protein EcfA2 | Morganella morganii S4 |
6 | group_3078 | LHKJJB_09210 | 176875 | 177723 | 1 | ecfA2 | Energy-coupling factor transporter ATP-binding protein EcfA2 | Morganella morganii S3 |
7 | group_2852 | LHKJJB_14355 | 7673 | 8083 | 1 | cbiO | Cobalt import ATP-binding protein CbiO | Morganella morganii S3 |
8 | group_3078 | HKOGLL_08760 | 176875 | 177723 | 1 | ecfA2 | Energy-coupling factor transporter ATP-binding protein EcfA2 | Morganella morganii S5 |
9 | group_2852 | HKOGLL_12975 | 7673 | 8083 | 1 | cbiO | Cobalt import ATP-binding protein CbiO | Morganella morganii S5 |
10 | group_252 | F4V73_RS06465 | 1348226 | 1348984 | -1 | ATP-binding cassette domain-containing protein | Morganella psychrotolerans | |
11 | group_2298 | F4V73_RS06470 | 1348971 | 1349813 | -1 | ABC transporter ATP-binding protein | Morganella psychrotolerans | |
12 | group_1648 | F4V73_RS19660 | 1716368 | 1716592 | -1 | hypothetical protein | Morganella psychrotolerans | |
13 | group_3078 | F4V73_RS13755 | 384423 | 385271 | 1 | ATP-binding cassette domain-containing protein | Morganella psychrotolerans | |
14 | group_2852 | F4V73_RS16925 | 7308 | 7952 | 1 | ABC transporter ATP-binding protein | Morganella psychrotolerans |