COG1122


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1122, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 15 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Energy-coupling factor transporter ATP-binding protein EcfA2
Function(s) descr. Inorganic ion transport and metabolism (P)
General function prediction only (R)

Occurence in the database

COG1122 is associated with 15 different proteins (see tab "Protein list" and "Profile")
The 15 proteins are classified into 5 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2852 FBDBKF_10825 133653 134063 -1 cbiO Cobalt import ATP-binding protein CbiO Morganella morganii S1
1 group_3078 FBDBKF_18840 14606 15454 -1 ecfA2 Energy-coupling factor transporter ATP-binding protein EcfA2 Morganella morganii S1
2 group_3078 EHELCC_17035 14607 15455 -1 ecfA2 Energy-coupling factor transporter ATP-binding protein EcfA2 Morganella morganii S2
3 group_2852 EHELCC_19415 4439 5083 -1 ecfA2 Energy-coupling factor transporter ATP-binding protein EcfA2 Morganella morganii S2
4 group_2852 NLDBIP_14990 133643 134053 -1 cbiO Cobalt import ATP-binding protein CbiO Morganella morganii S4
5 group_3078 NLDBIP_18415 14606 15454 -1 ecfA2 Energy-coupling factor transporter ATP-binding protein EcfA2 Morganella morganii S4
6 group_3078 LHKJJB_09210 176875 177723 1 ecfA2 Energy-coupling factor transporter ATP-binding protein EcfA2 Morganella morganii S3
7 group_2852 LHKJJB_14355 7673 8083 1 cbiO Cobalt import ATP-binding protein CbiO Morganella morganii S3
8 group_3078 HKOGLL_08760 176875 177723 1 ecfA2 Energy-coupling factor transporter ATP-binding protein EcfA2 Morganella morganii S5
9 group_2852 HKOGLL_12975 7673 8083 1 cbiO Cobalt import ATP-binding protein CbiO Morganella morganii S5
10 group_252 F4V73_RS06465 1348226 1348984 -1 ATP-binding cassette domain-containing protein Morganella psychrotolerans
11 group_2298 F4V73_RS06470 1348971 1349813 -1 ABC transporter ATP-binding protein Morganella psychrotolerans
12 group_1648 F4V73_RS19660 1716368 1716592 -1 hypothetical protein Morganella psychrotolerans
13 group_3078 F4V73_RS13755 384423 385271 1 ATP-binding cassette domain-containing protein Morganella psychrotolerans
14 group_2852 F4V73_RS16925 7308 7952 1 ABC transporter ATP-binding protein Morganella psychrotolerans