COG1120


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1120, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 32 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component
Function(s) descr. Inorganic ion transport and metabolism (P)
Coenzyme transport and metabolism (H)

Occurence in the database

COG1120 is associated with 32 different proteins (see tab "Protein list" and "Profile")
The 32 proteins are classified into 5 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_659 FBDBKF_02290 145113 145853 -1 fepC ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component Morganella morganii S1
1 group_2550 FBDBKF_02540 206249 206995 1 fepC ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component Morganella morganii S1
2 group_688 FBDBKF_02845 263679 264419 -1 fepC ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component Morganella morganii S1
3 group_1450 FBDBKF_09220 74297 75070 1 fepC ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component Morganella morganii S1
4 group_1973 FBDBKF_14800 60528 61346 -1 fepC ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component Morganella morganii S1
5 group_659 EHELCC_02760 532933 533673 -1 fepC ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component Morganella morganii S2
6 group_2550 EHELCC_03010 594069 594815 1 fepC ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component Morganella morganii S2
7 group_688 EHELCC_03315 651499 652239 -1 fepC ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component Morganella morganii S2
8 group_1450 EHELCC_10190 71034 71807 -1 fepC ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component Morganella morganii S2
9 group_1973 EHELCC_15605 90604 91422 -1 fepC ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component Morganella morganii S2
10 group_688 NLDBIP_00145 27897 28637 1 fepC ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component Morganella morganii S4
11 group_2550 NLDBIP_00450 85321 86067 -1 fepC ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component Morganella morganii S4
12 group_659 NLDBIP_00700 146463 147203 1 fepC ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component Morganella morganii S4
13 group_1450 NLDBIP_10535 49305 50078 -1 fepC ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component Morganella morganii S4
14 group_1973 NLDBIP_16135 90604 91422 -1 fepC ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component Morganella morganii S4
15 group_659 LHKJJB_01335 245482 246222 -1 fepC ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component Morganella morganii S3
16 group_2550 LHKJJB_01585 306618 307364 1 fepC ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component Morganella morganii S3
17 group_688 LHKJJB_01890 364048 364788 -1 fepC ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component Morganella morganii S3
18 group_1450 LHKJJB_10820 141450 142223 1 fepC ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component Morganella morganii S3
19 group_1973 LHKJJB_15705 25264 26082 1 fepC ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component Morganella morganii S3
20 group_659 HKOGLL_01375 250993 251733 -1 fepC ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component Morganella morganii S5
21 group_2550 HKOGLL_01625 312129 312875 1 fepC ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component Morganella morganii S5
22 group_688 HKOGLL_01930 369559 370299 -1 fepC ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component Morganella morganii S5
23 group_1450 HKOGLL_13880 74751 75524 1 fepC ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component Morganella morganii S5
24 group_1973 HKOGLL_14825 24476 25294 1 fepC ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component Morganella morganii S5
25 group_659 F4V73_RS04665 983230 983970 -1 ABC transporter ATP-binding protein Morganella psychrotolerans
26 group_2550 F4V73_RS04965 1058223 1058969 1 ABC transporter ATP-binding protein Morganella psychrotolerans
27 group_688 F4V73_RS05285 1123675 1124415 -1 ABC transporter ATP-binding protein Morganella psychrotolerans
28 group_1973 F4V73_RS07600 1590012 1590827 -1 ABC transporter ATP-binding protein Morganella psychrotolerans
29 group_1450 F4V73_RS10750 281187 281960 -1 ABC transporter ATP-binding protein Morganella psychrotolerans
30 group_1973 PMI_RS01115 273673 274467 1 ABC transporter ATP-binding protein Proteus mirabilis HI4320
31 group_1450 PMI_RS13190 2928384 2929178 1 ABC transporter ATP-binding protein Proteus mirabilis HI4320