COG0845


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0845, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 31 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Multidrug efflux pump subunit AcrA (membrane-fusion protein)
Function(s) descr. Cell wall/membrane/envelope biogenesis (M)
Defense mechanisms (V)

Occurence in the database

COG0845 is associated with 31 different proteins (see tab "Protein list" and "Profile")
The 31 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2554 FBDBKF_02600 216403 217491 1 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein) Morganella morganii S1
1 group_291 FBDBKF_07045 72617 73579 1 macA macrolide transporter subunit MacA Morganella morganii S1
2 group_166 FBDBKF_15970 46728 47924 -1 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein) Morganella morganii S1
3 group_2188 FBDBKF_16490 25683 26900 -1 acrA MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit Morganella morganii S1
4 group_2554 EHELCC_03070 604223 605311 1 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein) Morganella morganii S2
5 group_291 EHELCC_03925 112607 113569 -1 macA macrolide transporter subunit MacA Morganella morganii S2
6 group_2188 EHELCC_08355 142669 143886 -1 acrA MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit Morganella morganii S2
7 group_166 EHELCC_18575 4162 5358 -1 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein) Morganella morganii S2
8 group_2554 NLDBIP_00390 74825 75913 -1 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein) Morganella morganii S4
9 group_291 NLDBIP_03925 112403 113365 -1 macA macrolide transporter subunit MacA Morganella morganii S4
10 group_2188 NLDBIP_08680 142669 143886 -1 acrA MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit Morganella morganii S4
11 group_166 NLDBIP_17405 34167 35363 -1 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein) Morganella morganii S4
12 group_2554 LHKJJB_01645 316772 317860 1 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein) Morganella morganii S3
13 group_2188 LHKJJB_05585 113273 114490 1 acrA MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit Morganella morganii S3
14 group_291 LHKJJB_09755 112517 113479 -1 macA macrolide transporter subunit MacA Morganella morganii S3
15 group_166 LHKJJB_17255 20825 22021 1 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein) Morganella morganii S3
16 group_2554 HKOGLL_01685 322283 323371 1 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein) Morganella morganii S5
17 group_2188 HKOGLL_05330 127260 128477 -1 acrA MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit Morganella morganii S5
18 group_291 HKOGLL_09220 77573 78535 1 macA macrolide transporter subunit MacA Morganella morganii S5
19 group_166 HKOGLL_17140 34167 35363 -1 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein) Morganella morganii S5
20 group_291 F4V73_RS01230 260043 261152 1 macA macrolide transporter subunit MacA Morganella psychrotolerans
21 group_2188 F4V73_RS03005 641577 642806 -1 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit Morganella psychrotolerans
22 group_291 F4V73_RS03930 832486 833745 1 efflux RND transporter periplasmic adaptor subunit Morganella psychrotolerans
23 group_2554 F4V73_RS05040 1071616 1072695 1 efflux RND transporter periplasmic adaptor subunit Morganella psychrotolerans
24 group_166 F4V73_RS16340 82431 83624 1 efflux RND transporter periplasmic adaptor subunit Morganella psychrotolerans
25 group_166 F4V73_RS17015 27773 28999 -1 efflux RND transporter periplasmic adaptor subunit Morganella psychrotolerans
26 group_166 PMI_RS00640 165050 166240 -1 efflux RND transporter periplasmic adaptor subunit Proteus mirabilis HI4320
27 group_291 PMI_RS03375 745124 746233 1 macA macrolide transporter subunit MacA Proteus mirabilis HI4320
28 group_2188 PMI_RS07730 1688243 1689478 1 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit Proteus mirabilis HI4320
29 group_166 PMI_RS13340 2955880 2956986 1 efflux RND transporter periplasmic adaptor subunit Proteus mirabilis HI4320
30 group_166 PMI_RS17905 3933031 3934170 1 efflux RND transporter periplasmic adaptor subunit Proteus mirabilis HI4320