COG0845
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0845, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries
within the database. 31 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.
Description
Description | Multidrug efflux pump subunit AcrA (membrane-fusion protein) |
---|---|
Function(s) descr. | Cell wall/membrane/envelope biogenesis (M) Defense mechanisms (V) |
Occurence in the database
COG0845 is associated with 31 different proteins (see tab "Protein list" and "Profile") |
The 31 proteins are classified into 4 different orthogroup(s) |
# | Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism |
---|---|---|---|---|---|---|---|---|
0 | group_2554 | FBDBKF_02600 | 216403 | 217491 | 1 | acrA | Multidrug efflux pump subunit AcrA (membrane-fusion protein) | Morganella morganii S1 |
1 | group_291 | FBDBKF_07045 | 72617 | 73579 | 1 | macA | macrolide transporter subunit MacA | Morganella morganii S1 |
2 | group_166 | FBDBKF_15970 | 46728 | 47924 | -1 | acrA | Multidrug efflux pump subunit AcrA (membrane-fusion protein) | Morganella morganii S1 |
3 | group_2188 | FBDBKF_16490 | 25683 | 26900 | -1 | acrA | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | Morganella morganii S1 |
4 | group_2554 | EHELCC_03070 | 604223 | 605311 | 1 | acrA | Multidrug efflux pump subunit AcrA (membrane-fusion protein) | Morganella morganii S2 |
5 | group_291 | EHELCC_03925 | 112607 | 113569 | -1 | macA | macrolide transporter subunit MacA | Morganella morganii S2 |
6 | group_2188 | EHELCC_08355 | 142669 | 143886 | -1 | acrA | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | Morganella morganii S2 |
7 | group_166 | EHELCC_18575 | 4162 | 5358 | -1 | acrA | Multidrug efflux pump subunit AcrA (membrane-fusion protein) | Morganella morganii S2 |
8 | group_2554 | NLDBIP_00390 | 74825 | 75913 | -1 | acrA | Multidrug efflux pump subunit AcrA (membrane-fusion protein) | Morganella morganii S4 |
9 | group_291 | NLDBIP_03925 | 112403 | 113365 | -1 | macA | macrolide transporter subunit MacA | Morganella morganii S4 |
10 | group_2188 | NLDBIP_08680 | 142669 | 143886 | -1 | acrA | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | Morganella morganii S4 |
11 | group_166 | NLDBIP_17405 | 34167 | 35363 | -1 | acrA | Multidrug efflux pump subunit AcrA (membrane-fusion protein) | Morganella morganii S4 |
12 | group_2554 | LHKJJB_01645 | 316772 | 317860 | 1 | acrA | Multidrug efflux pump subunit AcrA (membrane-fusion protein) | Morganella morganii S3 |
13 | group_2188 | LHKJJB_05585 | 113273 | 114490 | 1 | acrA | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | Morganella morganii S3 |
14 | group_291 | LHKJJB_09755 | 112517 | 113479 | -1 | macA | macrolide transporter subunit MacA | Morganella morganii S3 |
15 | group_166 | LHKJJB_17255 | 20825 | 22021 | 1 | acrA | Multidrug efflux pump subunit AcrA (membrane-fusion protein) | Morganella morganii S3 |
16 | group_2554 | HKOGLL_01685 | 322283 | 323371 | 1 | acrA | Multidrug efflux pump subunit AcrA (membrane-fusion protein) | Morganella morganii S5 |
17 | group_2188 | HKOGLL_05330 | 127260 | 128477 | -1 | acrA | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | Morganella morganii S5 |
18 | group_291 | HKOGLL_09220 | 77573 | 78535 | 1 | macA | macrolide transporter subunit MacA | Morganella morganii S5 |
19 | group_166 | HKOGLL_17140 | 34167 | 35363 | -1 | acrA | Multidrug efflux pump subunit AcrA (membrane-fusion protein) | Morganella morganii S5 |
20 | group_291 | F4V73_RS01230 | 260043 | 261152 | 1 | macA | macrolide transporter subunit MacA | Morganella psychrotolerans |
21 | group_2188 | F4V73_RS03005 | 641577 | 642806 | -1 | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | Morganella psychrotolerans | |
22 | group_291 | F4V73_RS03930 | 832486 | 833745 | 1 | efflux RND transporter periplasmic adaptor subunit | Morganella psychrotolerans | |
23 | group_2554 | F4V73_RS05040 | 1071616 | 1072695 | 1 | efflux RND transporter periplasmic adaptor subunit | Morganella psychrotolerans | |
24 | group_166 | F4V73_RS16340 | 82431 | 83624 | 1 | efflux RND transporter periplasmic adaptor subunit | Morganella psychrotolerans | |
25 | group_166 | F4V73_RS17015 | 27773 | 28999 | -1 | efflux RND transporter periplasmic adaptor subunit | Morganella psychrotolerans | |
26 | group_166 | PMI_RS00640 | 165050 | 166240 | -1 | efflux RND transporter periplasmic adaptor subunit | Proteus mirabilis HI4320 | |
27 | group_291 | PMI_RS03375 | 745124 | 746233 | 1 | macA | macrolide transporter subunit MacA | Proteus mirabilis HI4320 |
28 | group_2188 | PMI_RS07730 | 1688243 | 1689478 | 1 | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | Proteus mirabilis HI4320 | |
29 | group_166 | PMI_RS13340 | 2955880 | 2956986 | 1 | efflux RND transporter periplasmic adaptor subunit | Proteus mirabilis HI4320 | |
30 | group_166 | PMI_RS17905 | 3933031 | 3934170 | 1 | efflux RND transporter periplasmic adaptor subunit | Proteus mirabilis HI4320 |