Homologs in group_4277

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4277

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4277

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9ZHD0 0.0 559 65 1 407 3 silB Putative membrane fusion protein SilB Salmonella typhimurium
Q8XEH9 0.0 525 61 2 409 3 cusB Cation efflux system protein CusB Escherichia coli O157:H7
P77239 0.0 522 61 2 409 1 cusB Cation efflux system protein CusB Escherichia coli (strain K12)
Q8CWA2 0.0 521 61 2 409 3 cusB Cation efflux system protein CusB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P43505 6.49e-08 58 25 3 192 3 mtrC Membrane fusion protein MtrC Neisseria gonorrhoeae
Q8FWV8 0.000142 47 27 6 188 1 bepF Efflux pump periplasmic linker BepF Brucella suis biovar 1 (strain 1330)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS03930
Feature type CDS
Gene -
Product efflux RND transporter periplasmic adaptor subunit
Location 832486 - 833745 (strand: 1)
Length 1260 (nucleotides) / 419 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000001
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4277
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion
PF19335 Heavy metal binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0845 Cell wall/membrane/envelope biogenesis (M)
Defense mechanisms (V)		 MV Multidrug efflux pump subunit AcrA (membrane-fusion protein)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07798 membrane fusion protein, copper/silver efflux system Two-component system -

Protein Sequence

MASATLKYSAVIISSLIIGGAVAIGISPYFASAQNDTAVQEPERKVLFWYDPMKPDTKFDKPGKSPFMDMDLVPKYADEEGGGTGNGVRIDPVQQQNLGLKTAQVRRGTLDYIRTFPANVMFNDYQFVIVQARAGGFIEKVYPLTTGDRVRKGMPLIEITVPEWVEAQSEYLLLKETGGTAVQQRGVLERLRLAGMPENHIRQLQQKREIQTRFTITAPIDGVLTAFDLKTGMNIGKENIVAKIQGIDPIWLTVAVPESLAYLLDKQADLRLSVPSQPDKTFKITRRDLLAGADPVSRTLQLRLQVENPEELLKPGMNAYLTLTAKSGDMLLIPSRAVIDTGSEQRVITQDENGKFVPKKITVLRDSGGDTGIGNELREGEKVVVNGLFLIDSEANINGALERMRDTDPHSAYQGGGHD

Flanking regions ( +/- flanking 50bp)

TTCAGTCAATCTCAGTCCGGTAATTCACCGGCTATTTCCGGGGAACGGACATGGCATCTGCAACATTAAAATACAGCGCGGTGATCATCAGCAGCCTGATTATCGGCGGTGCGGTGGCAATCGGGATCTCACCGTATTTCGCTTCTGCACAGAATGATACCGCCGTTCAGGAACCGGAGCGGAAAGTCCTCTTTTGGTATGACCCGATGAAACCCGATACCAAATTTGATAAGCCGGGTAAATCCCCGTTTATGGATATGGATCTGGTGCCTAAATATGCGGATGAAGAGGGTGGCGGAACAGGCAACGGCGTACGGATAGACCCGGTTCAGCAGCAGAATCTCGGGTTGAAAACTGCACAGGTTCGTCGCGGAACGCTGGATTACATCCGCACATTTCCGGCAAATGTGATGTTTAATGATTATCAGTTTGTCATTGTCCAGGCGCGTGCCGGGGGATTTATTGAAAAAGTCTATCCGCTGACCACCGGTGACCGCGTGCGCAAAGGGATGCCGCTGATTGAGATCACCGTGCCGGAATGGGTGGAAGCGCAGAGTGAATATCTGCTGCTCAAAGAAACCGGCGGCACCGCTGTACAACAGCGCGGCGTGCTGGAACGCCTGCGCCTTGCAGGAATGCCGGAAAATCATATCCGGCAGTTGCAGCAAAAACGGGAAATTCAAACCCGGTTTACAATCACTGCCCCGATTGACGGTGTTCTGACTGCATTTGATCTGAAAACCGGGATGAATATCGGCAAAGAAAATATTGTTGCCAAAATTCAGGGGATCGATCCCATCTGGCTGACCGTCGCGGTACCGGAATCTCTCGCCTACCTGCTGGATAAACAGGCGGACTTGCGCCTTTCAGTACCGTCTCAGCCGGATAAAACCTTCAAAATCACCCGGCGCGACCTGCTGGCGGGGGCGGACCCGGTCAGTCGCACACTTCAGTTGCGTTTACAGGTTGAAAACCCGGAGGAATTGCTCAAACCCGGCATGAATGCGTATCTCACATTAACAGCAAAGAGCGGCGATATGCTGCTTATTCCGTCGCGGGCGGTGATTGATACCGGCAGTGAGCAACGGGTGATAACTCAGGATGAAAACGGGAAGTTTGTACCGAAAAAAATCACGGTGCTGCGCGATTCAGGGGGGGATACCGGGATTGGTAATGAACTGCGTGAAGGGGAAAAAGTAGTGGTGAACGGACTGTTCCTGATTGATTCCGAAGCCAATATTAATGGTGCGCTGGAGCGGATGCGCGATACTGACCCGCACTCAGCATATCAGGGAGGCGGTCATGATTGAATGGATTATCCGGCGCTCAGTCGCCAACCGCTTTCTGGTGATGTTCGGTG