Orthogroup:group_2581



Homologs in group_2581

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_02860 FBDBKF_02860 Morganella morganii S1 soxR DNA-binding transcriptional regulator, MerR family
EHELCC_03330 EHELCC_03330 Morganella morganii S2 soxR DNA-binding transcriptional regulator, MerR family
NLDBIP_00130 NLDBIP_00130 Morganella morganii S4 soxR DNA-binding transcriptional regulator, MerR family
LHKJJB_01905 LHKJJB_01905 Morganella morganii S3 soxR DNA-binding transcriptional regulator, MerR family
HKOGLL_01945 HKOGLL_01945 Morganella morganii S5 soxR DNA-binding transcriptional regulator, MerR family
F4V73_RS05300 F4V73_RS05300 Morganella psychrotolerans - MerR family transcriptional regulator

Distribution of group_2581 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2581 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2581

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2581.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 soxR 5
2 - 1

Product

# Product Occurence
1 DNA-binding transcriptional regulator, MerR family 5
2 MerR family transcriptional regulator 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0789 6 K Transcription (K) DNA-binding transcriptional regulator, MerR family

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13411 6 MerR HTH family regulatory protein

Annotations of the 45 SwissProt hits

Annotation Number of occurrences
HTH-type transcriptional activator SoxR homolog 1
HTH-type transcriptional activator TipA 2
HTH-type transcriptional regulator AdhR 1
HTH-type transcriptional regulator CueR 10
HTH-type transcriptional regulator GlnR 1
HTH-type transcriptional regulator HmrR 2
HTH-type transcriptional regulator TnrA 1
HTH-type transcriptional regulator YfmP 1
HTH-type transcriptional regulator ZntR 2
HTH-type transcriptional regulator ZntR homolog 1
Heavy metal-dependent transcription regulator 1 1
Heavy metal-dependent transcription regulator 2 1
Mercuric resistance operon regulatory protein 8
Mercuric resistance operon regulatory protein (Fragment) 1
Nodulation protein NolA 2
Nodulation protein NolA (Fragment) 1
Probable heavy metal-dependent transcriptional regulator HI_0293 1
Redox-sensitive transcriptional activator SoxR 6
Uncharacterized HTH-type transcriptional regulator PA4778 1
Uncharacterized HTH-type transcriptional regulator slr0701 1

Protein length

Unique protein length 140

Protein length distribution