Homologs in group_2554

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02600 FBDBKF_02600 67.7 Morganella morganii S1 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein)
EHELCC_03070 EHELCC_03070 67.7 Morganella morganii S2 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein)
NLDBIP_00390 NLDBIP_00390 67.7 Morganella morganii S4 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein)
LHKJJB_01645 LHKJJB_01645 67.7 Morganella morganii S3 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein)
HKOGLL_01685 HKOGLL_01685 67.7 Morganella morganii S5 acrA Multidrug efflux pump subunit AcrA (membrane-fusion protein)

Distribution of the homologs in the orthogroup group_2554

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2554

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
B7L9U7 3.74e-10 64 25 11 331 3 mdtA Multidrug resistance protein MdtA Escherichia coli (strain 55989 / EAEC)
P76397 5.87e-10 63 25 11 331 2 mdtA Multidrug resistance protein MdtA Escherichia coli (strain K12)
A8A1U6 5.87e-10 63 25 11 331 3 mdtA Multidrug resistance protein MdtA Escherichia coli O9:H4 (strain HS)
B1X7H0 5.87e-10 63 25 11 331 3 mdtA Multidrug resistance protein MdtA Escherichia coli (strain K12 / DH10B)
C4ZSG2 5.87e-10 63 25 11 331 3 mdtA Multidrug resistance protein MdtA Escherichia coli (strain K12 / MC4100 / BW2952)
B7UTB2 5.87e-10 63 25 11 331 3 mdtA Multidrug resistance protein MdtA Escherichia coli O127:H6 (strain E2348/69 / EPEC)
C9XVZ5 7.76e-10 63 25 10 331 3 mdtA Multidrug resistance protein MdtA Cronobacter turicensis (strain DSM 18703 / CCUG 55852 / LMG 23827 / z3032)
Q83KI5 1.03e-09 62 25 11 331 3 mdtA Putative multidrug resistance protein MdtA Shigella flexneri
B7MWY7 1.14e-09 63 25 11 331 3 mdtA Multidrug resistance protein MdtA Escherichia coli O81 (strain ED1a)
B7M457 1.23e-09 62 25 11 331 3 mdtA Multidrug resistance protein MdtA Escherichia coli O8 (strain IAI1)
Q0TG16 1.33e-09 62 25 11 331 3 mdtA Multidrug resistance protein MdtA Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A7ZNP7 1.61e-09 62 25 11 331 3 mdtA Multidrug resistance protein MdtA Escherichia coli O139:H28 (strain E24377A / ETEC)
B7NCB0 2.35e-09 62 25 11 331 3 mdtA Multidrug resistance protein MdtA Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B2TYA9 2.79e-09 61 24 10 331 3 mdtA Multidrug resistance protein MdtA Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
B5YUD2 2.79e-09 61 24 10 331 3 mdtA Multidrug resistance protein MdtA Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8X7J5 2.79e-09 61 24 10 331 3 mdtA Multidrug resistance protein MdtA Escherichia coli O157:H7
B7ME86 3.4e-09 61 25 11 331 3 mdtA Multidrug resistance protein MdtA Escherichia coli O45:K1 (strain S88 / ExPEC)
Q8CVX8 3.86e-09 61 25 11 330 3 mdtA Multidrug resistance protein MdtA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
B7NQB2 5.05e-09 60 25 11 331 3 mdtA Multidrug resistance protein MdtA Escherichia coli O7:K1 (strain IAI39 / ExPEC)
Q7N3E3 6.45e-09 60 23 10 332 3 mdtA Multidrug resistance protein MdtA Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
Q8Z5F8 8.24e-09 60 26 13 331 3 mdtA Multidrug resistance protein MdtA Salmonella typhi
C0Q1F4 8.24e-09 60 26 13 331 3 mdtA Multidrug resistance protein MdtA Salmonella paratyphi C (strain RKS4594)
B7LV38 8.66e-09 60 25 11 331 3 mdtA Multidrug resistance protein MdtA Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
B4T9U0 9.6e-09 60 26 13 331 3 mdtA Multidrug resistance protein MdtA Salmonella heidelberg (strain SL476)
Q8ZNQ3 1e-08 60 26 13 331 3 mdtA Multidrug resistance protein MdtA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q88F89 1.09e-08 59 23 8 335 1 pvdR Pyoverdine export membrane fusion protein PvdR Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
B1LNW7 1.53e-08 59 25 11 331 3 mdtA Multidrug resistance protein MdtA Escherichia coli (strain SMS-3-5 / SECEC)
A4WCC0 4.13e-08 58 24 8 333 3 mdtA Multidrug resistance protein MdtA Enterobacter sp. (strain 638)
A6TBH3 1.28e-07 56 24 12 332 3 mdtA Multidrug resistance protein MdtA Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
P94176 7.68e-07 54 24 9 292 3 czcB Cation efflux system protein CzcB Alcaligenes sp. (strain CT14)
D2BTK6 3.29e-06 52 22 13 337 3 mdtA Multidrug resistance protein MdtA Dickeya zeae (strain Ech586)
P13510 3.82e-06 52 24 9 287 1 czcB Cobalt-zinc-cadmium resistance protein CzcB Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34)
A1JKX1 5.61e-06 51 23 12 336 3 mdtA Multidrug resistance protein MdtA Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
C6DBC6 5.68e-06 51 23 11 327 3 mdtA Multidrug resistance protein MdtA Pectobacterium carotovorum subsp. carotovorum (strain PC1)
F2EYD8 6.51e-06 51 23 12 332 3 mdtA Multidrug resistance protein MdtA Pantoea ananatis (strain AJ13355)
Q44585 2.13e-05 49 26 12 293 3 nccB Nickel-cobalt-cadmium resistance protein NccB Alcaligenes xylosoxydans xylosoxydans
Q9I191 5.36e-05 48 22 9 326 1 pvdR Pyoverdine export membrane fusion protein PvdR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
A4TMR2 8.01e-05 48 23 13 339 3 mdtA Multidrug resistance protein MdtA Yersinia pestis (strain Pestoides F)
Q1CK59 8.01e-05 48 23 13 339 3 mdtA Multidrug resistance protein MdtA Yersinia pestis bv. Antiqua (strain Nepal516)
Q8ZCW1 8.01e-05 48 23 13 339 3 mdtA Multidrug resistance protein MdtA Yersinia pestis
Q1C5M1 8.01e-05 48 23 13 339 3 mdtA Multidrug resistance protein MdtA Yersinia pestis bv. Antiqua (strain Antiqua)
A7FG18 9.65e-05 47 23 13 339 3 mdtA Multidrug resistance protein MdtA Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
B1JSD5 9.99e-05 47 23 13 339 3 mdtA Multidrug resistance protein MdtA Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
C5BHN6 0.000108 47 22 10 322 3 mdtA Multidrug resistance protein MdtA Edwardsiella ictaluri (strain 93-146)
Q668C7 0.000119 47 23 13 339 3 mdtA Multidrug resistance protein MdtA Yersinia pseudotuberculosis serotype I (strain IP32953)
B2K9L9 0.000119 47 23 13 339 3 mdtA Multidrug resistance protein MdtA Yersinia pseudotuberculosis serotype IB (strain PB1/+)
P27303 0.000199 46 22 6 235 1 emrA Multidrug export protein EmrA Escherichia coli (strain K12)
P43505 0.000246 46 25 7 207 3 mtrC Membrane fusion protein MtrC Neisseria gonorrhoeae
D3V7P2 0.000324 46 21 11 334 3 mdtA Multidrug resistance protein MdtA Xenorhabdus bovienii (strain SS-2004)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS05040
Feature type CDS
Gene -
Product efflux RND transporter periplasmic adaptor subunit
Location 1071616 - 1072695 (strand: 1)
Length 1080 (nucleotides) / 359 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2554
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0845 Cell wall/membrane/envelope biogenesis (M)
Defense mechanisms (V)		 MV Multidrug efflux pump subunit AcrA (membrane-fusion protein)

Protein Sequence

MTVTLILSAASFYCGAETARVSVTHPQITPASDEIVLPGTFVARNEIAVGSPLQQQMVTDVFAEEGQWVEKNQLLATLESPQQSATVRQLQAETEKAAANIRRESTLAQQSQRDLARLTPLARSGVISASEFEKAKSDAQALKALTDAARAELRQLQAQLAREKSQEDKSKIFAPAAGVISERHAVKGMLSDNAMLFKIIENNEIEFEAPVYAADLAQMRAGHEVILKTGQQTALSGKIRYLPAKLSSLTQSGGVRAAITDMPENEFAHPGQTGVMVYTKTPQSRQTLPYSAIRTGKNGERSVFIVNDNKALQHPVQTGRTENGRIEILSPLTKDADVVINAQAFLTNGDTVTPVKAFE

Flanking regions ( +/- flanking 50bp)

GGGTAACTCCCCGGAATGGAAATAGTATTACGATGAAAACCAGGTTGCTGATGACGGTAACACTTATTTTATCTGCTGCATCATTTTACTGTGGTGCAGAAACTGCCCGCGTCAGTGTGACACATCCGCAGATAACCCCGGCATCAGACGAAATAGTGCTGCCGGGAACCTTTGTGGCAAGAAATGAGATTGCGGTTGGTTCACCGCTGCAACAACAAATGGTAACGGATGTCTTTGCCGAAGAAGGTCAGTGGGTAGAGAAAAATCAGTTGTTGGCGACACTTGAATCGCCGCAGCAGAGCGCAACGGTTCGTCAGTTACAGGCCGAAACTGAAAAAGCGGCGGCTAATATCCGCCGGGAAAGTACCCTCGCTCAGCAATCACAGCGTGATCTGGCGCGTCTGACGCCGCTGGCACGCAGTGGTGTTATCTCTGCCAGTGAATTTGAAAAAGCCAAATCTGATGCACAAGCCCTGAAGGCGCTGACGGATGCCGCCCGTGCAGAACTGCGTCAGTTACAGGCGCAACTGGCGCGGGAAAAGAGTCAGGAAGATAAATCAAAGATTTTCGCCCCTGCCGCCGGGGTTATCAGTGAACGCCATGCGGTTAAAGGTATGCTGTCAGATAACGCCATGTTATTTAAAATAATCGAAAATAATGAGATTGAATTTGAAGCCCCCGTTTATGCTGCTGACCTGGCTCAGATGCGCGCCGGACATGAGGTCATACTTAAAACCGGACAGCAGACTGCGCTTTCAGGGAAAATTCGCTATCTCCCGGCCAAATTATCATCACTGACACAATCCGGCGGTGTACGTGCCGCTATCACGGATATGCCGGAAAATGAGTTCGCACACCCGGGACAAACCGGGGTCATGGTTTATACGAAAACACCGCAATCGCGGCAGACACTGCCTTACAGCGCTATCCGCACCGGTAAAAATGGTGAGCGCTCTGTTTTTATTGTGAATGACAATAAAGCATTACAGCACCCGGTACAGACCGGGAGAACAGAAAACGGGCGCATTGAGATCCTCAGCCCGCTGACAAAGGATGCTGATGTGGTTATCAATGCGCAGGCATTTCTGACAAATGGTGACACTGTCACGCCCGTTAAGGCTTTTGAATGAAATTACAGCTATCTTCATGGGCGATTACCCGCCCCATTCCCGTTATTGTT