COG0784


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0784, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 15 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description CheY-like REC (receiver) domain, includes chemotaxis protein CheY and sporulation regulator Spo0F
Function(s) descr. Signal transduction mechanisms (T)

Occurence in the database

COG0784 is associated with 15 different proteins (see tab "Protein list" and "Profile")
The 15 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_480 FBDBKF_00765 138974 139366 -1 cheY chemotaxis response regulator CheY Morganella morganii S1
1 group_971 FBDBKF_05365 82225 83253 -1 rssB two-component system response regulator RssB Morganella morganii S1
2 group_480 EHELCC_00780 169502 169894 1 cheY chemotaxis response regulator CheY Morganella morganii S2
3 group_971 EHELCC_12225 98241 99269 1 rssB two-component system response regulator RssB Morganella morganii S2
4 group_480 NLDBIP_02680 510242 510634 -1 cheY chemotaxis response regulator CheY Morganella morganii S4
5 group_971 NLDBIP_12565 98196 99224 1 rssB two-component system response regulator RssB Morganella morganii S4
6 group_480 LHKJJB_04195 117483 117875 -1 cheY chemotaxis response regulator CheY Morganella morganii S3
7 group_971 LHKJJB_12425 98241 99269 1 rssB two-component system response regulator RssB Morganella morganii S3
8 group_480 HKOGLL_02850 169707 170099 1 cheY chemotaxis response regulator CheY Morganella morganii S5
9 group_971 HKOGLL_11040 98241 99269 1 rssB two-component system response regulator RssB Morganella morganii S5
10 group_971 F4V73_RS05820 1239134 1240162 -1 rssB two-component system response regulator RssB Morganella psychrotolerans
11 group_480 F4V73_RS06765 1403920 1404312 -1 cheY chemotaxis response regulator CheY Morganella psychrotolerans
12 group_4377 PMI_RS04005 900933 901433 -1 response regulator Proteus mirabilis HI4320
13 group_971 PMI_RS07220 1581673 1582692 -1 rssB two-component system response regulator RssB Proteus mirabilis HI4320
14 group_480 PMI_RS08115 1773210 1773599 -1 cheY chemotaxis response regulator CheY Proteus mirabilis HI4320