COG0784
Help to interpret the results
Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected COG entry COG0784
Protein list: lists the 15 occurences of the COG entry within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the COG entry of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entry has been clustered.
Orthogroups are shown in red if they are annotated with that particular COG entry in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and COG entry prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entry.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entry prediction.
Description
Description |
CheY-like REC (receiver) domain, includes chemotaxis protein CheY and sporulation regulator Spo0F |
Function(s) descr. |
Signal transduction mechanisms (T) |
Occurence in the database
COG0784 is associated with 15 different
proteins
|
The 15 proteins are classified into 3 different orthogroup(s)
|
|
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_556 |
FBDBKF_00765 |
138974 |
139366 |
-1 |
cheY |
chemotaxis response regulator CheY |
Morganella morganii S1 |
1 |
group_1038 |
FBDBKF_05365 |
82225 |
83253 |
-1 |
rssB |
two-component system response regulator RssB |
Morganella morganii S1 |
2 |
group_556 |
EHELCC_00780 |
169502 |
169894 |
1 |
cheY |
chemotaxis response regulator CheY |
Morganella morganii S2 |
3 |
group_1038 |
EHELCC_12225 |
98241 |
99269 |
1 |
rssB |
two-component system response regulator RssB |
Morganella morganii S2 |
4 |
group_556 |
NLDBIP_02680 |
510242 |
510634 |
-1 |
cheY |
chemotaxis response regulator CheY |
Morganella morganii S4 |
5 |
group_1038 |
NLDBIP_12565 |
98196 |
99224 |
1 |
rssB |
two-component system response regulator RssB |
Morganella morganii S4 |
6 |
group_556 |
LHKJJB_04195 |
117483 |
117875 |
-1 |
cheY |
chemotaxis response regulator CheY |
Morganella morganii S3 |
7 |
group_1038 |
LHKJJB_12425 |
98241 |
99269 |
1 |
rssB |
two-component system response regulator RssB |
Morganella morganii S3 |
8 |
group_556 |
HKOGLL_02850 |
169707 |
170099 |
1 |
cheY |
chemotaxis response regulator CheY |
Morganella morganii S5 |
9 |
group_1038 |
HKOGLL_11040 |
98241 |
99269 |
1 |
rssB |
two-component system response regulator RssB |
Morganella morganii S5 |
10 |
group_1038 |
F4V73_RS05820 |
1239134 |
1240162 |
-1 |
rssB |
two-component system response regulator RssB |
Morganella psychrotolerans |
11 |
group_556 |
F4V73_RS06765 |
1403920 |
1404312 |
-1 |
cheY |
chemotaxis response regulator CheY |
Morganella psychrotolerans |
12 |
group_4282 |
PMI_RS04005 |
900933 |
901433 |
-1 |
|
response regulator |
Proteus mirabilis HI4320 |
13 |
group_1038 |
PMI_RS07220 |
1581673 |
1582692 |
-1 |
rssB |
two-component system response regulator RssB |
Proteus mirabilis HI4320 |
14 |
group_556 |
PMI_RS08115 |
1773210 |
1773599 |
-1 |
cheY |
chemotaxis response regulator CheY |
Proteus mirabilis HI4320 |