COG0765


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0765, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 33 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description ABC-type amino acid transport system, permease component
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG0765 is associated with 33 different proteins (see tab "Protein list" and "Profile")
The 33 proteins are classified into 5 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_3165 FBDBKF_00455 68564 69328 1 hisM ABC-type amino acid transport system, permease component Morganella morganii S1
1 group_1547 FBDBKF_10020 97525 98262 1 hisM ABC-type amino acid transport system, permease component Morganella morganii S1
2 group_1548 FBDBKF_10025 98262 98939 1 gltK glutamate/aspartate ABC transporter permease GltK Morganella morganii S1
3 group_1639 FBDBKF_10810 130610 131347 1 hisM ABC-type amino acid transport system, permease component Morganella morganii S1
4 group_1640 FBDBKF_10815 131349 132122 1 hisM ABC-type amino acid transport system, permease component Morganella morganii S1
5 group_3165 EHELCC_01090 239540 240304 -1 hisM ABC-type amino acid transport system, permease component Morganella morganii S2
6 group_1547 EHELCC_04820 289490 290227 1 hisM ABC-type amino acid transport system, permease component Morganella morganii S2
7 group_1548 EHELCC_04825 290227 290904 1 gltK glutamate/aspartate ABC transporter permease GltK Morganella morganii S2
8 group_1639 EHELCC_19400 1396 2133 1 hisM ABC-type amino acid transport system, permease component Morganella morganii S2
9 group_1640 EHELCC_19405 2135 2908 1 hisM ABC-type amino acid transport system, permease component Morganella morganii S2
10 group_3165 NLDBIP_02370 439832 440596 1 hisM ABC-type amino acid transport system, permease component Morganella morganii S4
11 group_1547 NLDBIP_04820 289286 290023 1 hisM ABC-type amino acid transport system, permease component Morganella morganii S4
12 group_1548 NLDBIP_04825 290023 290700 1 gltK glutamate/aspartate ABC transporter permease GltK Morganella morganii S4
13 group_1639 NLDBIP_14975 130600 131337 1 hisM ABC-type amino acid transport system, permease component Morganella morganii S4
14 group_1640 NLDBIP_14980 131339 132112 1 hisM ABC-type amino acid transport system, permease component Morganella morganii S4
15 group_3165 LHKJJB_03885 47073 47837 1 hisM ABC-type amino acid transport system, permease component Morganella morganii S3
16 group_1548 LHKJJB_13805 44678 45355 -1 gltK glutamate/aspartate ABC transporter permease GltK Morganella morganii S3
17 group_1547 LHKJJB_13810 45355 46092 -1 hisM ABC-type amino acid transport system, permease component Morganella morganii S3
18 group_1640 LHKJJB_14365 9614 10387 -1 hisM ABC-type amino acid transport system, permease component Morganella morganii S3
19 group_1639 LHKJJB_14370 10389 11126 -1 hisM ABC-type amino acid transport system, permease component Morganella morganii S3
20 group_3165 HKOGLL_03160 239745 240509 -1 hisM ABC-type amino acid transport system, permease component Morganella morganii S5
21 group_1547 HKOGLL_12725 98306 99043 1 hisM ABC-type amino acid transport system, permease component Morganella morganii S5
22 group_1548 HKOGLL_12730 99043 99720 1 gltK glutamate/aspartate ABC transporter permease GltK Morganella morganii S5
23 group_1640 HKOGLL_12985 9614 10387 -1 hisM ABC-type amino acid transport system, permease component Morganella morganii S5
24 group_1639 HKOGLL_12990 10389 11126 -1 hisM ABC-type amino acid transport system, permease component Morganella morganii S5
25 group_1548 F4V73_RS00310 72751 73428 -1 gltK glutamate/aspartate ABC transporter permease GltK Morganella psychrotolerans
26 group_1547 F4V73_RS00315 73428 74165 -1 amino acid ABC transporter permease Morganella psychrotolerans
27 group_1639 F4V73_RS14495 128036 128773 1 amino acid ABC transporter permease Morganella psychrotolerans
28 group_1640 F4V73_RS14500 128775 129557 1 amino acid ABC transporter permease Morganella psychrotolerans
29 group_1548 PMI_RS02145 503224 503898 -1 gltK glutamate/aspartate ABC transporter permease GltK Proteus mirabilis HI4320
30 group_1547 PMI_RS02150 503898 504638 -1 amino acid ABC transporter permease Proteus mirabilis HI4320
31 group_1639 PMI_RS14330 3179940 3180677 1 amino acid ABC transporter permease Proteus mirabilis HI4320
32 group_1640 PMI_RS14335 3180679 3181428 1 amino acid ABC transporter permease Proteus mirabilis HI4320