Homologs in group_1547

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10020 FBDBKF_10020 95.9 Morganella morganii S1 hisM ABC-type amino acid transport system, permease component
EHELCC_04820 EHELCC_04820 95.9 Morganella morganii S2 hisM ABC-type amino acid transport system, permease component
NLDBIP_04820 NLDBIP_04820 95.9 Morganella morganii S4 hisM ABC-type amino acid transport system, permease component
LHKJJB_13810 LHKJJB_13810 95.9 Morganella morganii S3 hisM ABC-type amino acid transport system, permease component
HKOGLL_12725 HKOGLL_12725 95.9 Morganella morganii S5 hisM ABC-type amino acid transport system, permease component
PMI_RS02150 PMI_RS02150 85.7 Proteus mirabilis HI4320 - amino acid ABC transporter permease

Distribution of the homologs in the orthogroup group_1547

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1547

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AER3 2.21e-145 409 81 0 244 1 gltJ Glutamate/aspartate import permease protein GltJ Escherichia coli (strain K12)
P0AER4 2.21e-145 409 81 0 244 3 gltJ Glutamate/aspartate import permease protein GltJ Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
O34671 1.88e-26 105 29 2 217 2 glnM Probable glutamine ABC transporter permease protein GlnM Bacillus subtilis (strain 168)
P0AFT4 2.38e-25 102 33 2 196 3 tcyL L-cystine transport system permease protein TcyL Shigella flexneri
P0AFT2 2.38e-25 102 33 2 196 1 tcyL L-cystine transport system permease protein TcyL Escherichia coli (strain K12)
P0AFT3 2.38e-25 102 33 2 196 3 tcyL L-cystine transport system permease protein TcyL Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P52625 1.76e-24 100 30 2 202 3 patM Probable amino-acid ABC transporter permease protein PatM Vibrio harveyi
P0AEQ9 9.38e-23 95 25 4 236 3 glnP Glutamine transport system permease protein GlnP Shigella flexneri
P0AEQ6 9.38e-23 95 25 4 236 1 glnP Glutamine transport system permease protein GlnP Escherichia coli (strain K12)
P0AEQ7 9.38e-23 95 25 4 236 3 glnP Glutamine transport system permease protein GlnP Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AEQ8 9.38e-23 95 25 4 236 3 glnP Glutamine transport system permease protein GlnP Escherichia coli O157:H7
P0AER5 1.21e-22 95 30 2 171 1 gltK Glutamate/aspartate import permease protein GltK Escherichia coli (strain K12)
P0AER6 1.21e-22 95 30 2 171 3 gltK Glutamate/aspartate import permease protein GltK Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AER7 1.21e-22 95 30 2 171 3 gltK Glutamate/aspartate import permease protein GltK Escherichia coli O157:H7
P45767 2.68e-21 94 40 1 123 3 yhdX Putative amino-acid ABC transporter permease protein YhdX Escherichia coli (strain K12)
P45767 2.19e-06 51 37 0 74 3 yhdX Putative amino-acid ABC transporter permease protein YhdX Escherichia coli (strain K12)
P54953 1.04e-20 90 29 1 180 1 yxeN Probable amino-acid permease protein YxeN Bacillus subtilis (strain 168)
P42200 1.58e-20 90 28 4 214 1 tcyB L-cystine transport system permease protein TcyB Bacillus subtilis (strain 168)
Q52813 1.34e-19 90 36 0 129 3 aapQ General L-amino acid transport system permease protein AapQ Rhizobium johnstonii (strain DSM 114642 / LMG 32736 / 3841)
Q52813 2.84e-06 51 35 0 76 3 aapQ General L-amino acid transport system permease protein AapQ Rhizobium johnstonii (strain DSM 114642 / LMG 32736 / 3841)
P54536 2.29e-19 86 30 4 179 1 artQ Arginine transport system permease protein ArtQ Bacillus subtilis (strain 168)
O34315 3.05e-19 86 26 2 210 1 tcyL L-cystine transport system permease protein TcyL Bacillus subtilis (strain 168)
O34606 3.58e-19 85 26 3 222 2 glnP Probable glutamine ABC transporter permease protein GlnP Bacillus subtilis (strain 168)
Q52664 3.86e-19 89 37 1 133 3 bztB Glutamate/glutamine/aspartate/asparagine transport system permease protein BztB Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
Q52664 2.67e-06 51 32 1 80 3 bztB Glutamate/glutamine/aspartate/asparagine transport system permease protein BztB Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
Q8NQU3 6.55e-19 87 27 4 209 1 argU Arginine transport system permease protein ArgU Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
P41083 6.6e-18 82 29 2 177 3 glnP Putative glutamine transport system permease protein GlnP Rickettsia prowazekii (strain Madrid E)
P45090 9.04e-18 82 26 3 208 3 artQ Arginine ABC transporter permease protein ArtQ Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P35113 1.03e-17 82 28 4 237 3 nocM Nopaline transport system permease protein NocM Agrobacterium fabrum (strain C58 / ATCC 33970)
P35114 2.37e-17 81 28 3 224 2 occM Octopine transport system permease protein OccM Rhizobium radiobacter
Q4UKC4 9.2e-17 79 29 3 177 3 glnP Putative glutamine transport system permease protein GlnP Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q92J96 1.28e-16 79 28 3 196 3 glnP Putative glutamine transport system permease protein GlnP Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q52814 1.98e-16 80 27 2 168 3 aapM General L-amino acid transport system permease protein AapM Rhizobium johnstonii (strain DSM 114642 / LMG 32736 / 3841)
P48244 2.14e-16 79 31 2 163 1 gluC Glutamate transport system permease protein GluC Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q8RQL5 2.39e-16 78 30 2 163 3 gluC Glutamate transport system permease protein GluC Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)
Q68XN8 3.05e-16 78 29 2 177 3 glnP Putative glutamine transport system permease protein GlnP Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Q1RHC0 3.18e-16 78 28 2 177 3 glnP Putative glutamine transport system permease protein GlnP Rickettsia bellii (strain RML369-C)
Q52665 3.9e-16 80 28 2 179 3 bztC Glutamate/glutamine/aspartate/asparagine transport system permease protein BztC Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
Q8RQL4 4.18e-16 79 26 5 234 3 gluD Glutamate transport system permease protein GluD Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)
P55660 4.29e-16 78 28 3 217 3 NGR_a01530 Probable amino-acid ABC transporter permease protein y4tF Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P55661 6.69e-16 77 26 2 183 3 NGR_a01520 Probable amino-acid ABC transporter permease protein y4tG Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P48245 2.7e-15 76 28 3 182 1 gluD Glutamate transport system permease protein GluD Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
P0AEU6 9.06e-15 74 27 5 225 3 hisM Histidine/lysine/arginine/ornithine transport system permease protein HisM Shigella flexneri
P0AEU3 9.06e-15 74 27 5 225 1 hisM Histidine/lysine/arginine/ornithine transport system permease protein HisM Escherichia coli (strain K12)
P0AEU4 9.06e-15 74 27 5 225 3 hisM Histidine/lysine/arginine/ornithine transport system permease protein HisM Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AEU5 9.06e-15 74 27 5 225 3 hisM Histidine/lysine/arginine/ornithine transport system permease protein HisM Escherichia coli O157:H7
O34931 1.39e-14 73 26 4 225 1 tcyM L-cystine transport system permease protein TcyM Bacillus subtilis (strain 168)
P72296 1.76e-14 73 26 3 211 3 occM Octopine transport system permease protein OccM Rhizobium meliloti
P45023 4.22e-14 72 24 3 168 3 HI_1079 Probable amino-acid ABC transporter permease protein HI_0179 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P0A2I7 4.67e-14 72 25 3 217 1 hisM Histidine/lysine/arginine/ornithine transport system permease protein HisM Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2I8 4.67e-14 72 25 3 217 3 hisM Histidine/lysine/arginine/ornithine transport system permease protein HisM Salmonella typhi
P42399 1.13e-13 71 25 4 219 3 yckA Probable amino-acid ABC transporter permease protein YckA Bacillus subtilis (strain 168)
P35118 1.07e-12 68 28 3 181 3 nocQ Nopaline transport system permease protein NocQ Agrobacterium fabrum (strain C58 / ATCC 33970)
P0AE33 6.42e-12 66 24 6 221 3 artM Arginine ABC transporter permease protein ArtM Shigella flexneri
P0AE30 6.42e-12 66 24 6 221 1 artM Arginine ABC transporter permease protein ArtM Escherichia coli (strain K12)
P0AE31 6.42e-12 66 24 6 221 3 artM Arginine ABC transporter permease protein ArtM Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AE32 6.42e-12 66 24 6 221 3 artM Arginine ABC transporter permease protein ArtM Escherichia coli O157:H7
P45768 6.62e-12 67 28 1 167 1 yhdY Inner membrane amino-acid ABC transporter permease protein YhdY Escherichia coli (strain K12)
P52094 2.77e-11 64 28 5 183 1 hisQ Histidine/lysine/arginine/ornithine transport system permease protein HisQ Escherichia coli (strain K12)
P0A2I9 4.24e-11 64 28 5 183 1 hisQ Histidine/lysine/arginine/ornithine transport system permease protein HisQ Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2J0 4.24e-11 64 28 5 183 3 hisQ Histidine/lysine/arginine/ornithine transport system permease protein HisQ Salmonella typhi
P45089 9.85e-10 60 27 6 191 3 artM Arginine ABC transporter permease protein ArtM Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P72295 1.01e-09 60 28 7 221 3 occQ Octopine transport system permease protein OccQ Rhizobium meliloti
P0A4N5 1.05e-06 51 25 3 180 2 occQ Octopine transport system permease protein OccQ Rhizobium radiobacter
P0A4N6 1.05e-06 51 25 3 180 3 occQ Octopine transport system permease protein OccQ Agrobacterium tumefaciens (strain Ach5)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS00315
Feature type CDS
Gene -
Product amino acid ABC transporter permease
Location 73428 - 74165 (strand: -1)
Length 738 (nucleotides) / 245 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1547
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF00528 Binding-protein-dependent transport system inner membrane component

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0765 Amino acid transport and metabolism (E) E ABC-type amino acid transport system, permease component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K10003 glutamate/aspartate transport system permease protein ABC transporters
Two-component system		 -

Protein Sequence

MSANWDWGIFFQPAPFGNTTYFGWILSGLKVTVMLSICAWIIAFLVGSLFGILRTVPNRFLSSLGTIYVEIFRNVPLIVQFFTWYLVIPEFLPPAARDWFKMELDPNIQFFISSMLCLGLFTAARMTEQVRAAIQSLPRGQKAAGLAVGLTLPQTYRYVLLPNAYRVIIPPMTSEMLNLVKNSAIASTIGLVDMAAQAGKLLDYSARAYESFTAITLAYVGINVIIMVAMHLLEKRVRLPGTGGH

Flanking regions ( +/- flanking 50bp)

AGATTATTTTTCTTGTACAGGGAGTTCGTTCTTTTAACGGGAGCCGCGCTATGTCAGCTAACTGGGATTGGGGGATTTTTTTTCAGCCCGCCCCCTTCGGCAATACCACCTACTTCGGCTGGATCCTGTCCGGTCTGAAAGTGACGGTAATGCTGTCAATTTGTGCCTGGATAATCGCCTTTCTGGTGGGGTCACTGTTCGGCATTTTGCGTACCGTACCGAACCGGTTTCTCTCTTCGCTCGGCACTATTTATGTGGAAATTTTCCGTAATGTGCCACTGATCGTTCAGTTTTTTACCTGGTATCTGGTTATTCCGGAGTTCCTGCCACCGGCTGCCCGCGACTGGTTCAAGATGGAGCTCGATCCGAATATCCAGTTCTTTATTTCCTCAATGCTTTGTCTGGGTCTGTTTACCGCTGCCCGCATGACGGAACAGGTGCGCGCCGCTATTCAGTCACTGCCGCGCGGTCAGAAAGCCGCCGGTCTTGCGGTGGGACTGACTCTGCCGCAGACCTACCGCTATGTTCTGCTGCCGAATGCTTACCGCGTGATTATTCCGCCGATGACATCGGAAATGCTGAATCTGGTAAAAAATTCAGCTATCGCCTCCACTATCGGGCTGGTTGATATGGCGGCACAGGCAGGAAAATTGCTCGATTACTCCGCCCGGGCGTATGAATCCTTTACCGCCATCACCCTCGCGTATGTCGGCATTAACGTCATTATTATGGTGGCAATGCATTTACTGGAAAAACGGGTGCGTCTGCCAGGGACAGGAGGTCACTGATGTATGAATTTGACTGGAGTTCCGTGATGCCGGGTATGCCGTTCCTGTTA