COG0304


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0304, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 18 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description 3-oxoacyl-(acyl-carrier-protein) synthase
Function(s) descr. Lipid transport and metabolism (I)
Secondary metabolites biosynthesis, transport and catabolism (Q)

Occurence in the database

COG0304 is associated with 18 different proteins (see tab "Protein list" and "Profile")
The 18 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1922 FBDBKF_14300 59851 61065 -1 fabB beta-ketoacyl-ACP synthase I Morganella morganii S1
1 group_98 FBDBKF_14705 39070 40314 -1 fabF beta-ketoacyl-ACP synthase II Morganella morganii S1
2 group_1922 EHELCC_07980 55920 57134 1 fabB beta-ketoacyl-ACP synthase I Morganella morganii S2
3 group_98 EHELCC_15510 69146 70390 -1 fabF beta-ketoacyl-ACP synthase II Morganella morganii S2
4 group_1922 NLDBIP_08305 55920 57134 1 fabB beta-ketoacyl-ACP synthase I Morganella morganii S4
5 group_98 NLDBIP_16040 69146 70390 -1 fabF beta-ketoacyl-ACP synthase II Morganella morganii S4
6 group_1922 LHKJJB_05960 200025 201239 -1 fabB beta-ketoacyl-ACP synthase I Morganella morganii S3
7 group_98 LHKJJB_15800 46296 47540 1 fabF beta-ketoacyl-ACP synthase II Morganella morganii S3
8 group_1922 HKOGLL_04955 40511 41725 1 fabB beta-ketoacyl-ACP synthase I Morganella morganii S5
9 group_98 HKOGLL_14920 45508 46752 1 fabF beta-ketoacyl-ACP synthase II Morganella morganii S5
10 group_1922 F4V73_RS02605 549349 550563 1 fabB beta-ketoacyl-ACP synthase I Morganella psychrotolerans
11 group_98 F4V73_RS07500 1567779 1569023 -1 fabF beta-ketoacyl-ACP synthase II Morganella psychrotolerans
12 group_98 F4V73_RS12000 554253 555431 1 beta-ketoacyl-[acyl-carrier-protein] synthase family protein Morganella psychrotolerans
13 group_98 F4V73_RS12015 556693 557919 1 beta-ketoacyl-ACP synthase Morganella psychrotolerans
14 group_98 PMI_RS04235 952376 953617 1 fabF beta-ketoacyl-ACP synthase II Proteus mirabilis HI4320
15 group_1922 PMI_RS08800 1924567 1925778 -1 fabB beta-ketoacyl-ACP synthase I Proteus mirabilis HI4320
16 group_98 PMI_RS14370 3187174 3188391 -1 beta-ketoacyl synthase N-terminal-like domain-containing protein Proteus mirabilis HI4320
17 group_98 PMI_RS14375 3188388 3190949 -1 beta-ketoacyl-[acyl-carrier-protein] synthase family protein Proteus mirabilis HI4320