Orthogroup:group_1960


Homologs in group_1960

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14690 FBDBKF_14690 Morganella morganii S1 tmk dTMP kinase
EHELCC_15495 EHELCC_15495 Morganella morganii S2 tmk dTMP kinase
NLDBIP_16025 NLDBIP_16025 Morganella morganii S4 tmk dTMP kinase
LHKJJB_15815 LHKJJB_15815 Morganella morganii S3 tmk dTMP kinase
HKOGLL_14935 HKOGLL_14935 Morganella morganii S5 tmk dTMP kinase
F4V73_RS07485 F4V73_RS07485 Morganella psychrotolerans tmk dTMP kinase
PMI_RS04250 PMI_RS04250 Proteus mirabilis HI4320 tmk dTMP kinase

Distribution of group_1960 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1960 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1960

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1960.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 tmk 7

Product

# Product Occurence
1 dTMP kinase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0125 7 F Nucleotide transport and metabolism (F) Thymidylate kinase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02223 7 Thymidylate kinase

Annotations of the 506 SwissProt hits

Annotation Number of occurrences
Probable thymidylate kinase 13
Thymidylate kinase 493

Protein length

Min length 212
Max length 214
Mean length (sd) 212.6 (1.0)
Median length 212.0

Protein length distribution