Orthogroup:group_25


Homologs in group_25

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17 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09475 FBDBKF_09475 Morganella morganii S1 - Big-1 domain-containing protein
FBDBKF_09485 FBDBKF_09485 Morganella morganii S1 - Big-1 domain-containing protein
EHELCC_09925 EHELCC_09925 Morganella morganii S2 - Big-1 domain-containing protein
EHELCC_09935 EHELCC_09935 Morganella morganii S2 - Big-1 domain-containing protein
NLDBIP_10280 NLDBIP_10280 Morganella morganii S4 - invasin domain 3-containing protein
NLDBIP_19245 NLDBIP_19245 Morganella morganii S4 - Big-1 domain-containing protein
NLDBIP_19255 NLDBIP_19255 Morganella morganii S4 - Big-1 domain-containing protein
LHKJJB_11075 LHKJJB_11075 Morganella morganii S3 - invasin domain 3-containing protein
LHKJJB_19115 LHKJJB_19115 Morganella morganii S3 - Big-1 domain-containing protein
LHKJJB_19125 LHKJJB_19125 Morganella morganii S3 - Big-1 domain-containing protein
HKOGLL_14135 HKOGLL_14135 Morganella morganii S5 - invasin domain 3-containing protein
HKOGLL_18895 HKOGLL_18895 Morganella morganii S5 - Big-1 domain-containing protein
HKOGLL_18905 HKOGLL_18905 Morganella morganii S5 - Big-1 domain-containing protein
F4V73_RS10495 F4V73_RS10495 Morganella psychrotolerans - invasin domain 3-containing protein
F4V73_RS10505 F4V73_RS10505 Morganella psychrotolerans - Ig-like domain-containing protein
PMI_RS00110 PMI_RS00110 Proteus mirabilis HI4320 - Ig-like domain-containing protein
PMI_RS19225 PMI_RS19225 Proteus mirabilis HI4320 - Ig-like domain-containing protein

Distribution of group_25 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_25 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_25

Orthogroup content: 17 members

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This page summarizes the annotation of all members of the orthologous group group_25.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 17

Product

# Product Occurence
1 Big-1 domain-containing protein 10
2 invasin domain 3-containing protein 4
3 Ig-like domain-containing protein 3

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1388 1 M Cell wall/membrane/envelope biogenesis (M) LysM repeat
COG3210 12 U Intracellular trafficking, secretion, and vesicular transport (U) Large exoprotein involved in heme utilization or adhesion
COG4676 3 S Function unknown (S) Uncharacterized conserved protein YfaP, DUF2135 family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K13735 16 adhesin/invasin Bacterial invasion of epithelial cells
Yersinia infection		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01476 1 LysM domain
PF02368 1 Bacterial Ig-like domain (group 2)
PF02369 17 Bacterial Ig-like domain (group 1)
PF09134 15 Invasin, domain 3
PF11924 13 Inverse autotransporter, beta-domain
PF13620 5 Carboxypeptidase regulatory-like domain

Annotations of the 20 SwissProt hits

Annotation Number of occurrences
Filamin-A 2
Filamin-B 2
Filamin-C 3
Gelation factor 1
Intimin 4
Intimin (Fragment) 1
Invasin 2
Inverse autotransporter adhesin YeeJ 3
Putative attaching and effacing protein homolog 1
Uncharacterized protein YchO 1

Protein length

Min length 86
Max length 3343
Mean length (sd) 2094.2 (1015.0)
Median length 2193.0

Protein length distribution