Orthogroup:group_2


Homologs in group_2

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27 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_00045 FBDBKF_00045 Morganella morganii S1 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
FBDBKF_11500 FBDBKF_11500 Morganella morganii S1 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
FBDBKF_13045 FBDBKF_13045 Morganella morganii S1 - Phage tail protein
FBDBKF_18570 FBDBKF_18570 Morganella morganii S1 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
FBDBKF_19340 FBDBKF_19340 Morganella morganii S1 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
EHELCC_01500 EHELCC_01500 Morganella morganii S2 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
EHELCC_15145 EHELCC_15145 Morganella morganii S2 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
EHELCC_17715 EHELCC_17715 Morganella morganii S2 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
EHELCC_19320 EHELCC_19320 Morganella morganii S2 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
NLDBIP_01960 NLDBIP_01960 Morganella morganii S4 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
NLDBIP_05045 NLDBIP_05045 Morganella morganii S4 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
NLDBIP_15675 NLDBIP_15675 Morganella morganii S4 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
NLDBIP_19450 NLDBIP_19450 Morganella morganii S4 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
NLDBIP_19910 NLDBIP_19910 Morganella morganii S4 - Phage tail protein
LHKJJB_00075 LHKJJB_00075 Morganella morganii S3 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
LHKJJB_16165 LHKJJB_16165 Morganella morganii S3 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
LHKJJB_19160 LHKJJB_19160 Morganella morganii S3 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
LHKJJB_19355 LHKJJB_19355 Morganella morganii S3 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
LHKJJB_19870 LHKJJB_19870 Morganella morganii S3 - Phage tail protein
HKOGLL_00115 HKOGLL_00115 Morganella morganii S5 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
HKOGLL_06025 HKOGLL_06025 Morganella morganii S5 - Phage tail protein
HKOGLL_15285 HKOGLL_15285 Morganella morganii S5 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
HKOGLL_15305 HKOGLL_15305 Morganella morganii S5 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
HKOGLL_19255 HKOGLL_19255 Morganella morganii S5 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
F4V73_RS02235 F4V73_RS02235 Morganella psychrotolerans - NlpC/P60 family protein
F4V73_RS18170 F4V73_RS18170 Morganella psychrotolerans - C40 family peptidase
PMI_RS02600 PMI_RS02600 Proteus mirabilis HI4320 - C40 family peptidase

Distribution of group_2 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2

Orthogroup content: 27 members

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This page summarizes the annotation of all members of the orthologous group group_2.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 17
2 rri1 10

Product

# Product Occurence
1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif 10
2 Phage tail protein 4
3 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif 10
4 NlpC/P60 family protein 1
5 C40 family peptidase 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1310 27 O Posttranslational modification, protein turnover, chaperones (O) Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K26975 27 Enterobacteria phage tail tip assembly protein K Virion - Bacteriophage lambda -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00877 27 NlpC/P60 family
PF14464 27 Prokaryotic homologs of the JAB domain

Annotations of the 7 SwissProt hits

Annotation Number of occurrences
CysO-cysteine peptidase 3
Desampylase 2
Tail tip assembly protein K 2

Protein length

Min length 235
Max length 257
Mean length (sd) 238.0 (4.4)
Median length 237.0

Protein length distribution