Orthogroup:group_2


Homologs in group_2

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27 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_00145 FBDBKF_00145 Morganella morganii S1 - Lysozyme
FBDBKF_12830 FBDBKF_12830 Morganella morganii S1 - Lysozyme
FBDBKF_13145 FBDBKF_13145 Morganella morganii S1 - Lysozyme
FBDBKF_18670 FBDBKF_18670 Morganella morganii S1 - Lysozyme
FBDBKF_19455 FBDBKF_19455 Morganella morganii S1 - Lysozyme
FBDBKF_19905 FBDBKF_19905 Morganella morganii S1 rrrD Phage-related lysozyme (muramidase), GH24 family
EHELCC_01400 EHELCC_01400 Morganella morganii S2 - Lysozyme
EHELCC_07710 EHELCC_07710 Morganella morganii S2 rrrD Phage-related lysozyme (muramidase), GH24 family
EHELCC_15245 EHELCC_15245 Morganella morganii S2 - Lysozyme
EHELCC_19490 EHELCC_19490 Morganella morganii S2 - Lysozyme
NLDBIP_02060 NLDBIP_02060 Morganella morganii S4 - Lysozyme
NLDBIP_08035 NLDBIP_08035 Morganella morganii S4 rrrD Phage-related lysozyme (muramidase), GH24 family
NLDBIP_09275 NLDBIP_09275 Morganella morganii S4 - Lysozyme
NLDBIP_15775 NLDBIP_15775 Morganella morganii S4 - Lysozyme
NLDBIP_19050 NLDBIP_19050 Morganella morganii S4 - Lysozyme
LHKJJB_03575 LHKJJB_03575 Morganella morganii S3 - Lysozyme
LHKJJB_04990 LHKJJB_04990 Morganella morganii S3 - Lysozyme
LHKJJB_06230 LHKJJB_06230 Morganella morganii S3 rrrD Phage-related lysozyme (muramidase), GH24 family
LHKJJB_16065 LHKJJB_16065 Morganella morganii S3 - Lysozyme
LHKJJB_18940 LHKJJB_18940 Morganella morganii S3 - Lysozyme
HKOGLL_00015 HKOGLL_00015 Morganella morganii S5 - Lysozyme
HKOGLL_05925 HKOGLL_05925 Morganella morganii S5 - Lysozyme
HKOGLL_15185 HKOGLL_15185 Morganella morganii S5 - Lysozyme
HKOGLL_19085 HKOGLL_19085 Morganella morganii S5 rrrD Phage-related lysozyme (muramidase), GH24 family
F4V73_RS02060 F4V73_RS02060 Morganella psychrotolerans - lysozyme
PMI_RS02440 PMI_RS02440 Proteus mirabilis HI4320 - lysozyme
PMI_RS04510 PMI_RS04510 Proteus mirabilis HI4320 - lysozyme

Distribution of group_2 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2

Orthogroup content: 27 members

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This page summarizes the annotation of all members of the orthologous group group_2.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 22
2 rrrD 5

Product

# Product Occurence
1 Lysozyme 19
2 Phage-related lysozyme (muramidase), GH24 family 5
3 lysozyme 3

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3772 27 M Cell wall/membrane/envelope biogenesis (M) Phage-related lysozyme (muramidase), GH24 family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01185 27 lysozyme [EC:3.2.1.17] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00959 27 Phage lysozyme

Annotations of the 22 SwissProt hits

Annotation Number of occurrences
Endolysin 7
Lysozyme RrrD 1
Probable prophage lysozyme 1
SAR-endolysin 13

Protein length

Min length 135
Max length 159
Mean length (sd) 157.2 (4.5)
Median length 158.0

Protein length distribution