Homologs in group_2

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26 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00045 FBDBKF_00045 52.7 Morganella morganii S1 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
FBDBKF_11500 FBDBKF_11500 52.7 Morganella morganii S1 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
FBDBKF_18570 FBDBKF_18570 38.8 Morganella morganii S1 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
FBDBKF_19340 FBDBKF_19340 37.0 Morganella morganii S1 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
EHELCC_01500 EHELCC_01500 52.7 Morganella morganii S2 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
EHELCC_15145 EHELCC_15145 38.8 Morganella morganii S2 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
EHELCC_17715 EHELCC_17715 52.7 Morganella morganii S2 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
EHELCC_19320 EHELCC_19320 37.0 Morganella morganii S2 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
NLDBIP_01960 NLDBIP_01960 52.7 Morganella morganii S4 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
NLDBIP_05045 NLDBIP_05045 52.7 Morganella morganii S4 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
NLDBIP_15675 NLDBIP_15675 38.8 Morganella morganii S4 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
NLDBIP_19450 NLDBIP_19450 37.0 Morganella morganii S4 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
NLDBIP_19910 NLDBIP_19910 98.3 Morganella morganii S4 - Phage tail protein
LHKJJB_00075 LHKJJB_00075 52.7 Morganella morganii S3 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
LHKJJB_16165 LHKJJB_16165 38.8 Morganella morganii S3 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
LHKJJB_19160 LHKJJB_19160 52.7 Morganella morganii S3 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
LHKJJB_19355 LHKJJB_19355 37.0 Morganella morganii S3 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
LHKJJB_19870 LHKJJB_19870 98.3 Morganella morganii S3 - Phage tail protein
HKOGLL_00115 HKOGLL_00115 52.7 Morganella morganii S5 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
HKOGLL_06025 HKOGLL_06025 100.0 Morganella morganii S5 - Phage tail protein
HKOGLL_15285 HKOGLL_15285 38.8 Morganella morganii S5 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
HKOGLL_15305 HKOGLL_15305 52.7 Morganella morganii S5 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
HKOGLL_19255 HKOGLL_19255 37.0 Morganella morganii S5 rri1 Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif
F4V73_RS02235 F4V73_RS02235 83.0 Morganella psychrotolerans - NlpC/P60 family protein
F4V73_RS18170 F4V73_RS18170 32.7 Morganella psychrotolerans - C40 family peptidase
PMI_RS02600 PMI_RS02600 35.6 Proteus mirabilis HI4320 - C40 family peptidase

Distribution of the homologs in the orthogroup group_2

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P03729 1.09e-83 251 60 1 192 3 K Tail tip assembly protein K Escherichia phage lambda
O64333 1.27e-37 134 35 3 226 3 gene Tail tip assembly protein K Escherichia phage N15 19

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_13045
Feature type CDS
Gene -
Product Phage tail protein
Location 3427 - 4155 (strand: -1)
Length 729 (nucleotides) / 242 (amino acids)
In genomic island -

Contig

Accession contig_16
Length 109220 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2
Orthogroup size 27
N. genomes 7

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Genomic region

Domains

PF00877 NlpC/P60 family
PF14464 Prokaryotic homologs of the JAB domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1310 Posttranslational modification, protein turnover, chaperones (O) O Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K26975 Enterobacteria phage tail tip assembly protein K Virion - Bacteriophage lambda -

Protein Sequence

MIKHAILAHAQADAPRESCGLIIRNEQGEQYLPCRNQSPDPEHHFTVGFDDFIRAGEQGEVVAVVHSHPGGQPYLSSADRAMQINSGLPWLLVCDEKIHRYEPVPPLLGRQFVHGVTDCYSLFRDAYHLTGINLPDFERHDDWWRHGEELYLDNMESNGFVRVKKDIQPGDVILFCYASSRANHAAVYLGAQTILHHIPNQLSKREAYNPRWQRMTHSIWRYRHWQPSGFTGICNDLDAVLI

Flanking regions ( +/- flanking 50bp)

GCATTTGTCTCCACTTCCCGTCTCAGCAAATAGCATTTCAGAGGGTTTCTATGATTAAACACGCCATTCTGGCGCACGCTCAGGCGGATGCGCCCCGGGAATCGTGCGGCCTGATTATCCGTAATGAGCAGGGGGAGCAGTATCTGCCGTGCCGGAATCAGTCTCCGGATCCTGAACACCATTTTACTGTCGGGTTTGACGATTTTATCCGTGCCGGTGAGCAGGGCGAGGTTGTGGCTGTGGTTCACAGTCACCCGGGCGGCCAGCCGTATCTGAGCAGTGCGGACAGGGCCATGCAGATAAACAGCGGACTGCCGTGGCTGCTGGTCTGTGACGAAAAAATCCACCGCTATGAACCGGTGCCGCCTCTGCTGGGCCGCCAGTTTGTGCACGGCGTGACCGACTGCTACAGCCTGTTCCGGGATGCGTATCACCTGACAGGCATCAACCTGCCGGATTTTGAACGGCATGATGACTGGTGGCGGCATGGTGAAGAACTCTACCTGGACAATATGGAGAGCAACGGTTTTGTCCGGGTGAAAAAAGATATTCAGCCGGGGGATGTGATCCTGTTCTGCTACGCCAGTTCCCGGGCGAATCACGCCGCCGTTTATCTTGGCGCACAGACCATTCTCCACCACATACCCAATCAACTCAGTAAGCGCGAGGCATATAACCCACGATGGCAACGAATGACTCACTCGATCTGGCGTTACCGCCACTGGCAACCTTCCGGCTTTACGGGGATTTGCAACGATTTGGACGCCGTTTTGATCTGAGTGTCAGAACGGCTGCTGAAGGTATTCATGGGCTTCTGCTCCAGCTCCCG