Orthogroup:group_1573


Homologs in group_1573

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10200 FBDBKF_10200 Morganella morganii S1 tapT tRNA U47 aminocarboxypropyltransferaseTapT/TuaA/ YfiP, DTW domain
EHELCC_05000 EHELCC_05000 Morganella morganii S2 tapT tRNA U47 aminocarboxypropyltransferaseTapT/TuaA/ YfiP, DTW domain
NLDBIP_05000 NLDBIP_05000 Morganella morganii S4 tapT tRNA U47 aminocarboxypropyltransferaseTapT/TuaA/ YfiP, DTW domain
LHKJJB_13630 LHKJJB_13630 Morganella morganii S3 tapT tRNA U47 aminocarboxypropyltransferaseTapT/TuaA/ YfiP, DTW domain
HKOGLL_12905 HKOGLL_12905 Morganella morganii S5 tapT tRNA U47 aminocarboxypropyltransferaseTapT/TuaA/ YfiP, DTW domain
F4V73_RS00130 F4V73_RS00130 Morganella psychrotolerans - tRNA-uridine aminocarboxypropyltransferase
PMI_RS01965 PMI_RS01965 Proteus mirabilis HI4320 - tRNA-uridine aminocarboxypropyltransferase

Distribution of group_1573 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1573 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1573

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1573.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 tapT 5
2 - 2

Product

# Product Occurence
1 tRNA U47 aminocarboxypropyltransferaseTapT/TuaA/ YfiP, DTW domain 5
2 tRNA-uridine aminocarboxypropyltransferase 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3148 7 J Translation, ribosomal structure and biogenesis (J) tRNA U47 aminocarboxypropyltransferaseTapT/TuaA/ YfiP, DTW domain

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K05812 7 tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03942 7 DTW domain

Annotations of the 5 SwissProt hits

Annotation Number of occurrences
tRNA-uridine aminocarboxypropyltransferase 1
tRNA-uridine aminocarboxypropyltransferase 2 4

Protein length

Min length 227
Max length 234
Mean length (sd) 233.0 (2.6)
Median length 234.0

Protein length distribution