Orthogroup:group_1573


Homologs in group_1573

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09845 FBDBKF_09845 Morganella morganii S1 gltA citrate synthase
EHELCC_04645 EHELCC_04645 Morganella morganii S2 gltA citrate synthase
NLDBIP_04645 NLDBIP_04645 Morganella morganii S4 gltA citrate synthase
LHKJJB_13985 LHKJJB_13985 Morganella morganii S3 gltA citrate synthase
HKOGLL_12550 HKOGLL_12550 Morganella morganii S5 gltA citrate synthase
F4V73_RS00500 F4V73_RS00500 Morganella psychrotolerans - citrate synthase
PMI_RS02775 PMI_RS02775 Proteus mirabilis HI4320 - citrate synthase

Distribution of group_1573 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1573 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1573

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1573.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 gltA 5
2 - 2

Product

# Product Occurence
1 citrate synthase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0372 7 C Energy production and conversion (C) Citrate synthase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00285 7 Citrate synthase, C-terminal domain

Annotations of the 130 SwissProt hits

Annotation Number of occurrences
2-methylcitrate synthase 7
2-methylcitrate synthase 1 1
2-methylcitrate synthase 2 1
2-methylcitrate synthase, mitochondrial 6
Alkylcitrate synthase phiJ 1
Alkylcitrate synthase tstJ 1
Citrate synthase 34
Citrate synthase (Fragment) 16
Citrate synthase 1 3
Citrate synthase 1, peroxisomal 1
Citrate synthase 2 1
Citrate synthase 2, peroxisomal 1
Citrate synthase 3, mitochondrial 1
Citrate synthase 3, peroxisomal 1
Citrate synthase 4, mitochondrial 1
Citrate synthase 5, mitochondrial 1
Citrate synthase, chromosomal 1
Citrate synthase, glyoxysomal 1
Citrate synthase, mitochondrial 29
Citrate synthase, mitochondrial (Fragment) 1
Citrate synthase, peroxisomal 2
Citrate synthase, plasmid 1
Citrate synthase-like protein 1
Citrate synthase-like protein clz17 1
Citrate synthase-like protein oryE 1
Citrate synthase-related protein DDB_G0287281 1
Citrate/2-methylcitrate synthase 1
Probable citrate synthase 1, mitochondrial 1
Probable citrate synthase 2, mitochondrial 1
Probable citrate synthase, mitochondrial 8
Putative citrate synthase 2 3

Protein length

Min length 427
Max length 431
Mean length (sd) 430.0 (1.7)
Median length 431.0

Protein length distribution