COG0372


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0372, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 13 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Citrate synthase
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG0372 is associated with 13 different proteins (see tab "Protein list" and "Profile")
The 13 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2590 FBDBKF_02935 281481 282644 1 prpC 2-methylcitrate synthase Morganella morganii S1
1 group_1524 FBDBKF_09845 65804 67099 1 gltA citrate synthase Morganella morganii S1
2 group_2590 EHELCC_03405 669301 670464 1 prpC 2-methylcitrate synthase Morganella morganii S2
3 group_1524 EHELCC_04645 257769 259064 1 gltA citrate synthase Morganella morganii S2
4 group_2590 NLDBIP_00055 9672 10835 -1 prpC 2-methylcitrate synthase Morganella morganii S4
5 group_1524 NLDBIP_04645 257565 258860 1 gltA citrate synthase Morganella morganii S4
6 group_2590 LHKJJB_01980 381850 383013 1 prpC 2-methylcitrate synthase Morganella morganii S3
7 group_1524 LHKJJB_13985 76518 77813 -1 gltA citrate synthase Morganella morganii S3
8 group_2590 HKOGLL_02020 387361 388524 1 prpC 2-methylcitrate synthase Morganella morganii S5
9 group_1524 HKOGLL_12550 66585 67880 1 gltA citrate synthase Morganella morganii S5
10 group_1524 F4V73_RS00500 105273 106559 -1 citrate synthase Morganella psychrotolerans
11 group_2590 F4V73_RS05380 1141746 1142909 1 prpC 2-methylcitrate synthase Morganella psychrotolerans
12 group_1524 PMI_RS02775 608354 609637 -1 citrate synthase Proteus mirabilis HI4320