Orthogroup:group_144


Homologs in group_144

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10 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09105 FBDBKF_09105 Morganella morganii S1 fimA Pilin (type 1 fimbrial protein)
EHELCC_10305 EHELCC_10305 Morganella morganii S2 fimA Pilin (type 1 fimbrial protein)
NLDBIP_10650 NLDBIP_10650 Morganella morganii S4 fimA Pilin (type 1 fimbrial protein)
LHKJJB_10705 LHKJJB_10705 Morganella morganii S3 fimA Pilin (type 1 fimbrial protein)
HKOGLL_13765 HKOGLL_13765 Morganella morganii S5 fimA Pilin (type 1 fimbrial protein)
F4V73_RS00870 F4V73_RS00870 Morganella psychrotolerans - fimbrial protein
F4V73_RS01055 F4V73_RS01055 Morganella psychrotolerans - fimbrial protein
F4V73_RS01850 F4V73_RS01850 Morganella psychrotolerans - fimbrial protein
F4V73_RS09385 F4V73_RS09385 Morganella psychrotolerans - fimbrial protein
F4V73_RS10845 F4V73_RS10845 Morganella psychrotolerans - fimbrial protein

Distribution of group_144 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_144 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_144

Orthogroup content: 10 members

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This page summarizes the annotation of all members of the orthologous group group_144.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 fimA 5
2 - 5

Product

# Product Occurence
1 Pilin (type 1 fimbrial protein) 5
2 fimbrial protein 5

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3539 10 N Cell motility (N) Pilin (type 1 fimbrial protein)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07345 8 major type 1 subunit fimbrin (pilin) Shigellosis
Pertussis		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00419 10 Fimbrial protein

Annotations of the 46 SwissProt hits

Annotation Number of occurrences
F17 fimbrial protein 1
Fimbria A protein 1
Fimbrial protein 987P 1
Fimbrial protein FimX 1
Fimbrial subunit ElfA 1
Fimbrial subunit type 1 3
Fimbrial subunit type 3 1
Fimbrial-like protein FimF 1
Fimbrin-like protein FimI 2
Laminin-binding fimbrial subunit ElfA 1
Long polar fimbria protein A 1
Major MR/P fimbria protein 1
Major fimbrial subunit 2
Major fimbrial subunit SMF-1 1
Minor fimbrial subunit HifD 2
Probable major fimbrial subunit LpfA 1
Protein FimF 1
Protein FimG 1
Protein MrkF 1
Putative fimbrin-like protein FimI 1
S-fimbrial adhesin protein SfaS 1
S-fimbrial protein subunit SfaA 1
S-fimbrial protein subunit SfaG 1
Serotype 2 fimbrial subunit 1
Serotype 3 fimbrial subunit 1
Type-1 fimbrial protein subunit 1
Type-1 fimbrial protein, A chain 4
Type-1 fimbrial protein, C chain 2
Uncharacterized fimbrial-like protein SfmA 2
Uncharacterized fimbrial-like protein SfmF 1
Uncharacterized fimbrial-like protein YadN 1
Uncharacterized fimbrial-like protein YcbU 1
Uncharacterized fimbrial-like protein YcbV 1
Uncharacterized fimbrial-like protein YdeR 1
Uncharacterized fimbrial-like protein YdeS 1
Uncharacterized fimbrial-like protein YgiL 1

Protein length

Min length 174
Max length 206
Mean length (sd) 185.1 (8.0)
Median length 184.0

Protein length distribution