Homologs in group_144

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9 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09105 FBDBKF_09105 24.1 Morganella morganii S1 fimA Pilin (type 1 fimbrial protein)
EHELCC_10305 EHELCC_10305 24.1 Morganella morganii S2 fimA Pilin (type 1 fimbrial protein)
NLDBIP_10650 NLDBIP_10650 24.1 Morganella morganii S4 fimA Pilin (type 1 fimbrial protein)
LHKJJB_10705 LHKJJB_10705 24.1 Morganella morganii S3 fimA Pilin (type 1 fimbrial protein)
HKOGLL_13765 HKOGLL_13765 24.1 Morganella morganii S5 fimA Pilin (type 1 fimbrial protein)
F4V73_RS00870 F4V73_RS00870 19.8 Morganella psychrotolerans - fimbrial protein
F4V73_RS01055 F4V73_RS01055 31.0 Morganella psychrotolerans - fimbrial protein
F4V73_RS09385 F4V73_RS09385 19.8 Morganella psychrotolerans - fimbrial protein
F4V73_RS10845 F4V73_RS10845 22.2 Morganella psychrotolerans - fimbrial protein

Distribution of the homologs in the orthogroup group_144

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_144

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P37921 8.55e-05 44 24 5 190 1 fimA Type-1 fimbrial protein, A chain Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P22595 8.83e-05 44 28 3 113 3 fimA Type-1 fimbrial protein subunit Serratia marcescens

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS01850
Feature type CDS
Gene -
Product fimbrial protein
Location 404376 - 404924 (strand: 1)
Length 549 (nucleotides) / 182 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000001
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_144
Orthogroup size 10
N. genomes 6

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Protein Sequence

MKLKYAVLPAAVAMLFSAAASAADTVDTVHDQGRIYFLGSVKAPTCVVNDGQKNFTVMLGDFEISSFPQSDTQVRGNEAVQIKLTECTGQWANLRLEATDRYNDSMIKFAETSNSAKGLALGLKSTDDAAAPFIKVDGKENNWQPIQAKTATYKFYPFIYQIADIVESGKLRAQVLYTIRYS

Flanking regions ( +/- flanking 50bp)

TTAAAACAGTGTTGTTAAATACTACGGTTATATACTATAAAGGAATTGTTATGAAACTGAAATATGCTGTTTTACCTGCTGCTGTTGCTATGTTATTCAGTGCTGCTGCATCTGCTGCTGATACAGTCGATACTGTACACGACCAGGGTCGTATTTATTTTCTTGGCTCAGTTAAAGCACCTACCTGTGTGGTTAACGACGGACAGAAAAACTTTACTGTGATGTTAGGTGATTTTGAAATATCCAGCTTTCCACAGTCTGACACTCAGGTTCGCGGAAATGAAGCAGTTCAAATTAAACTGACAGAATGTACCGGTCAGTGGGCAAATTTGAGACTGGAAGCGACTGATCGCTATAATGATAGCATGATTAAATTTGCTGAAACCAGTAATAGTGCGAAAGGTCTGGCTCTTGGTTTAAAATCTACAGATGACGCGGCTGCACCATTTATCAAAGTAGACGGTAAAGAAAATAACTGGCAGCCAATCCAGGCAAAAACAGCAACGTATAAATTCTATCCATTTATTTACCAGATAGCTGATATTGTTGAGTCCGGTAAACTCAGAGCACAAGTGTTATATACCATCAGATACAGCTGATCGATATAGATTTTCATAGGGTAGCGAATGCTACCCTATAAATAATAAAT