Homologs in group_144

Help

9 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09105 FBDBKF_09105 30.2 Morganella morganii S1 fimA Pilin (type 1 fimbrial protein)
EHELCC_10305 EHELCC_10305 30.2 Morganella morganii S2 fimA Pilin (type 1 fimbrial protein)
NLDBIP_10650 NLDBIP_10650 30.2 Morganella morganii S4 fimA Pilin (type 1 fimbrial protein)
LHKJJB_10705 LHKJJB_10705 30.2 Morganella morganii S3 fimA Pilin (type 1 fimbrial protein)
HKOGLL_13765 HKOGLL_13765 30.2 Morganella morganii S5 fimA Pilin (type 1 fimbrial protein)
F4V73_RS01055 F4V73_RS01055 20.9 Morganella psychrotolerans - fimbrial protein
F4V73_RS01850 F4V73_RS01850 19.8 Morganella psychrotolerans - fimbrial protein
F4V73_RS09385 F4V73_RS09385 27.1 Morganella psychrotolerans - fimbrial protein
F4V73_RS10845 F4V73_RS10845 31.4 Morganella psychrotolerans - fimbrial protein

Distribution of the homologs in the orthogroup group_144

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_144

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P12267 7e-70 214 59 3 206 3 mrkA Fimbrial subunit type 3 Klebsiella pneumoniae
P21650 1.49e-22 91 38 4 136 4 mrkF Protein MrkF Klebsiella pneumoniae
P45988 0.000217 44 28 4 107 3 hifA Major fimbrial subunit Haemophilus influenzae

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS00870
Feature type CDS
Gene -
Product fimbrial protein
Location 182660 - 183280 (strand: -1)
Length 621 (nucleotides) / 206 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000001
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_144
Orthogroup size 10
N. genomes 6

Actions

Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Protein Sequence

MKKLIIASAVVAAFGFSMANAATTSVGGGQVDFFGKVTDVSCTISVDGQQSDANVQLAPVSLTEVRSAGAHTYLKAKPFVIDVSNCLAVDQPVITRDTALTADKLGINWIGGNLLQNAVGKQAGYLANTDTSGAKDIQLALSINESANLTGKIIPGAAGQRKATPVVDLVNNSAKFTYYVGYATATPASVTTGAVHSYATYEVVYN

Flanking regions ( +/- flanking 50bp)

CGTTTTTATACTTTAGTTTATATAACCAATAATATTATAAGGAAGTAAGAATGAAAAAATTAATTATTGCATCTGCTGTTGTCGCTGCTTTTGGGTTTTCAATGGCAAATGCTGCGACAACCTCCGTCGGTGGCGGTCAGGTTGATTTCTTTGGTAAAGTAACCGACGTATCATGTACTATTTCCGTTGACGGTCAGCAAAGTGATGCTAATGTCCAGTTGGCTCCTGTTTCTCTGACTGAAGTCAGAAGTGCCGGCGCACATACTTATCTGAAAGCAAAACCTTTTGTTATCGACGTATCAAACTGCCTGGCTGTAGATCAGCCGGTAATTACCCGTGATACCGCATTAACTGCGGACAAACTGGGTATCAACTGGATAGGCGGTAACCTGTTACAAAATGCTGTCGGCAAACAGGCAGGCTATCTGGCTAACACCGATACCTCCGGTGCAAAAGATATTCAGTTAGCGCTGTCTATTAACGAAAGTGCAAACCTTACCGGTAAAATAATTCCCGGTGCTGCCGGACAAAGAAAAGCAACTCCGGTTGTTGATTTAGTCAACAACAGCGCGAAATTTACTTATTACGTCGGCTATGCAACGGCTACTCCTGCGTCTGTAACAACAGGTGCGGTACATAGTTACGCTACTTATGAAGTTGTTTACAATTAATATTTAAATCGTCTGGAATACTTTTTATCGTTTGTTCAGATGGTGTGAAT