Homologs in group_63

Help

12 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03110 FBDBKF_03110 69.6 Morganella morganii S1 gltD NADPH-dependent glutamate synthase beta chain or related oxidoreductase
FBDBKF_04805 FBDBKF_04805 54.3 Morganella morganii S1 hycB Fe-S-cluster-containing hydrogenase component 2
EHELCC_06095 EHELCC_06095 54.3 Morganella morganii S2 hycB Fe-S-cluster-containing hydrogenase component 2
EHELCC_07425 EHELCC_07425 69.6 Morganella morganii S2 gltD NADPH-dependent glutamate synthase beta chain or related oxidoreductase
NLDBIP_06415 NLDBIP_06415 54.3 Morganella morganii S4 hycB Fe-S-cluster-containing hydrogenase component 2
NLDBIP_07750 NLDBIP_07750 69.6 Morganella morganii S4 gltD NADPH-dependent glutamate synthase beta chain or related oxidoreductase
LHKJJB_03295 LHKJJB_03295 54.3 Morganella morganii S3 hycB Fe-S-cluster-containing hydrogenase component 2
LHKJJB_07285 LHKJJB_07285 69.6 Morganella morganii S3 gltD NADPH-dependent glutamate synthase beta chain or related oxidoreductase
HKOGLL_03645 HKOGLL_03645 69.6 Morganella morganii S5 gltD NADPH-dependent glutamate synthase beta chain or related oxidoreductase
HKOGLL_06770 HKOGLL_06770 54.3 Morganella morganii S5 hycB Fe-S-cluster-containing hydrogenase component 2
F4V73_RS09275 F4V73_RS09275 53.4 Morganella psychrotolerans - FAD-dependent oxidoreductase
F4V73_RS11815 F4V73_RS11815 70.5 Morganella psychrotolerans - FAD-dependent oxidoreductase

Distribution of the homologs in the orthogroup group_63

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_63

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P09832 0.0 690 69 2 471 1 gltD Glutamate synthase [NADPH] small chain Escherichia coli (strain K12)
E1V8I0 0.0 616 61 4 468 1 gltD Glutamate synthase [NADPH] small chain Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9)
P37127 0.0 582 61 3 459 2 aegA Putative oxidoreductase AegA Escherichia coli (strain K12)
Q46820 4.24e-172 501 55 3 446 2 uacF Putative oxidoreductase UacF Escherichia coli (strain K12)
Q05756 4.72e-122 367 45 7 470 1 gltD Glutamate synthase [NADPH] small chain Azospirillum brasilense
O08340 4.5e-87 275 44 8 405 3 gltD Putative glutamate synthase [NADPH] small chain Cereibacter sphaeroides
O34399 1.67e-82 266 36 10 489 1 gltB Glutamate synthase [NADPH] small chain Bacillus subtilis (strain 168)
P9WN19 2.35e-74 244 36 9 470 1 gltD Glutamate synthase [NADPH] small chain Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WN18 2.35e-74 244 36 9 470 3 gltD Glutamate synthase [NADPH] small chain Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q8U195 3.23e-71 236 35 9 473 1 sudA Sulfide dehydrogenase subunit alpha Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Q9C102 1.48e-63 226 34 11 473 1 glt1 Glutamate synthase [NADH] Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q0JKD0 6.81e-63 224 34 12 457 2 Os01g0681900 Glutamate synthase 1 [NADH], chloroplastic Oryza sativa subsp. japonica
Q12680 2.67e-62 223 33 11 481 1 GLT1 Glutamate synthase [NADH] Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q0DG35 1.23e-61 221 33 12 452 2 Os05g0555600 Glutamate synthase 2 [NADH], chloroplastic Oryza sativa subsp. japonica
Q9LV03 1.27e-61 221 36 14 462 1 GLT1 Glutamate synthase 1 [NADH], chloroplastic Arabidopsis thaliana
Q03460 1.39e-59 215 36 12 457 1 None Glutamate synthase [NADH], amyloplastic Medicago sativa
Q8X645 1.54e-54 190 33 12 439 3 preT NAD-dependent dihydropyrimidine dehydrogenase subunit PreT Escherichia coli O157:H7
P76440 1.01e-52 186 32 12 439 1 preT NAD-dependent dihydropyrimidine dehydrogenase subunit PreT Escherichia coli (strain K12)
Q74FU5 1.38e-51 188 32 8 463 1 sfrB NADPH-Fe(3+) oxidoreductase subunit beta Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
D7AF64 1.38e-51 188 32 8 463 3 sfrB NADPH-Fe(3+) oxidoreductase subunit beta Geobacter sulfurreducens (strain DL-1 / KN400)
Q8ZNL8 6.4e-50 178 31 12 438 3 preT NAD-dependent dihydropyrimidine dehydrogenase subunit PreT Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8Z5A6 4.34e-49 176 31 12 438 3 preT NAD-dependent dihydropyrimidine dehydrogenase subunit PreT homolog Salmonella typhi
Q28943 7.22e-47 177 31 15 440 1 DPYD Dihydropyrimidine dehydrogenase [NADP(+)] Sus scrofa
Q28007 1.91e-46 176 30 16 474 1 DPYD Dihydropyrimidine dehydrogenase [NADP(+)] Bos taurus
O89000 5.84e-46 174 29 13 442 2 Dpyd Dihydropyrimidine dehydrogenase [NADP(+)] Rattus norvegicus
Q8CHR6 6.81e-45 171 29 15 442 1 Dpyd Dihydropyrimidine dehydrogenase [NADP(+)] Mus musculus
Q6NYG8 2.63e-42 164 30 14 454 2 dpyd Dihydropyrimidine dehydrogenase [NADP(+)] Danio rerio
Q12882 2.29e-41 161 29 16 448 1 DPYD Dihydropyrimidine dehydrogenase [NADP(+)] Homo sapiens
Q18164 3.34e-41 160 31 14 460 3 dpyd-1 Dihydropyrimidine dehydrogenase [NADP(+)] Caenorhabditis elegans
Q5R895 4.25e-41 160 29 15 448 2 DPYD Dihydropyrimidine dehydrogenase [NADP(+)] Pongo abelii
A8XKG6 7.08e-38 150 30 15 456 3 dpyd-1 Probable dihydropyrimidine dehydrogenase [NADP(+)] Caenorhabditis briggsae
Q55FT1 1.92e-35 143 27 13 437 2 pyd1 Dihydropyrimidine dehydrogenase [NADP(+)] Dictyostelium discoideum
Q46811 1.21e-30 129 29 13 422 1 ygfK Putative oxidoreductase YgfK Escherichia coli (strain K12)
Q8XD75 2.54e-30 128 29 13 422 3 ygfK Putative oxidoreductase YgfK Escherichia coli O157:H7
A8AA47 5.76e-11 67 24 13 329 3 Igni_0617 Ferredoxin--NADP reductase Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125)
P82861 8.73e-10 64 25 7 240 2 fdxr NADPH:adrenodoxin oxidoreductase, mitochondrial Salvelinus fontinalis
Q8VQF5 1.88e-09 63 28 5 169 3 cinB Cindoxin reductase Citrobacter braakii
O59710 2.88e-09 62 28 5 170 3 arh1 Probable NADPH:adrenodoxin oxidoreductase, mitochondrial Schizosaccharomyces pombe (strain 972 / ATCC 24843)
A8M2W8 9.86e-09 60 26 11 310 3 Sare_0817 Ferredoxin--NADP reductase Salinispora arenicola (strain CNS-205)
Q6GIM7 5.99e-08 57 30 9 185 3 trxB Thioredoxin reductase Staphylococcus aureus (strain MRSA252)
P9WHH1 8.4e-08 57 26 13 330 1 trxB Thioredoxin reductase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WHH0 8.4e-08 57 26 13 330 3 trxB Thioredoxin reductase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P66011 1.01e-07 57 30 9 185 1 trxB Thioredoxin reductase Staphylococcus aureus (strain MW2)
Q6GB66 1.01e-07 57 30 9 185 3 trxB Thioredoxin reductase Staphylococcus aureus (strain MSSA476)
P99101 1.01e-07 57 30 9 185 1 trxB Thioredoxin reductase Staphylococcus aureus (strain N315)
P66010 1.01e-07 57 30 9 185 3 trxB Thioredoxin reductase Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q5HHQ4 1.01e-07 57 30 9 185 3 trxB Thioredoxin reductase Staphylococcus aureus (strain COL)
Q9V3T9 1.78e-07 57 27 4 174 2 dare NADPH:adrenodoxin oxidoreductase, mitochondrial Drosophila melanogaster
O33064 1.85e-07 57 30 8 165 3 fprB Probable ferredoxin/ferredoxin--NADP reductase Mycobacterium leprae (strain TN)
P9WJI1 7.18e-07 55 27 5 161 1 fprB Probable ferredoxin/ferredoxin--NADP reductase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WJI0 7.18e-07 55 27 5 161 3 fprB Probable ferredoxin/ferredoxin--NADP reductase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P65529 7.18e-07 55 27 5 161 3 fprB Probable ferredoxin/ferredoxin--NADP reductase Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P22570 7.29e-07 55 27 4 162 1 FDXR NADPH:adrenodoxin oxidoreductase, mitochondrial Homo sapiens
Q74KS6 7.98e-07 54 25 15 320 3 LJ_0501 Ferredoxin--NADP reductase Lactobacillus johnsonii (strain CNCM I-12250 / La1 / NCC 533)
Q8CPY8 8.53e-07 54 25 16 337 3 trxB Thioredoxin reductase Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HQW4 8.53e-07 54 25 16 337 3 trxB Thioredoxin reductase Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
Q8DUN5 1.07e-06 54 25 18 347 3 SMU_869 Ferredoxin--NADP reductase Streptococcus mutans serotype c (strain ATCC 700610 / UA159)
Q54KG7 1.49e-06 54 26 5 186 3 fdxr Probable NADPH:adrenodoxin oxidoreductase, mitochondrial Dictyostelium discoideum
O30973 1.62e-06 53 27 14 313 3 trxB Thioredoxin reductase Mycolicibacterium smegmatis
Q96YN9 1.67e-06 53 24 16 329 3 STK_21330 Ferredoxin--NADP reductase Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)
Q8W3L1 2.41e-06 53 27 5 167 1 MFDR NADPH:adrenodoxin oxidoreductase, mitochondrial Arabidopsis thaliana
P08165 2.76e-06 53 27 5 169 1 FDXR NADPH:adrenodoxin oxidoreductase, mitochondrial Bos taurus
Q045M0 5.69e-06 51 25 16 320 3 LGAS_0447 Ferredoxin--NADP reductase Lactobacillus gasseri (strain ATCC 33323 / DSM 20243 / BCRC 14619 / CIP 102991 / JCM 1131 / KCTC 3163 / NCIMB 11718 / NCTC 13722 / AM63)
P80880 6.56e-06 51 30 7 177 1 trxB Thioredoxin reductase Bacillus subtilis (strain 168)
Q8ENX4 6.6e-06 51 26 16 333 3 OB2351 Ferredoxin--NADP reductase 2 Oceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831)
Q0RRX8 7.27e-06 51 27 15 305 3 FRAAL1022 Ferredoxin--NADP reductase Frankia alni (strain DSM 45986 / CECT 9034 / ACN14a)
B1YKW2 1.02e-05 51 27 12 306 3 Exig_2313 Ferredoxin--NADP reductase 1 Exiguobacterium sibiricum (strain DSM 17290 / CCUG 55495 / CIP 109462 / JCM 13490 / 255-15)
P48360 1.39e-05 51 27 6 175 1 ARH1 Probable NADPH:adrenodoxin oxidoreductase, mitochondrial Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
B4S9F8 2.79e-05 49 24 15 310 3 Paes_1610 Ferredoxin--NADP reductase Prosthecochloris aestuarii (strain DSM 271 / SK 413)
P56522 3.06e-05 50 26 4 172 1 Fdxr NADPH:adrenodoxin oxidoreductase, mitochondrial Rattus norvegicus
Q61578 4.34e-05 49 26 5 195 1 Fdxr NADPH:adrenodoxin oxidoreductase, mitochondrial Mus musculus
A0LT79 5.21e-05 48 25 15 310 3 Acel_0866 Ferredoxin--NADP reductase Acidothermus cellulolyticus (strain ATCC 43068 / DSM 8971 / 11B)
P46843 5.34e-05 49 27 17 333 3 trxB/A Bifunctional thioredoxin reductase/thioredoxin Mycobacterium leprae (strain TN)
O32886 7.36e-05 48 27 5 176 3 fprA NADPH-ferredoxin reductase FprA Mycobacterium leprae (strain TN)
A8FB45 8.84e-05 48 25 12 316 3 BPUM_0777 Ferredoxin--NADP reductase 1 Bacillus pumilus (strain SAFR-032)
Q8KCB2 9.44e-05 48 23 11 312 1 CT1512 Ferredoxin--NADP reductase Chlorobaculum tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS)
A9H9C9 0.000101 48 27 17 355 3 GDI0711 Ferredoxin--NADP reductase Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / CCUG 37298 / CIP 103539 / LMG 7603 / PAl5)
Q82ZZ8 0.000153 47 24 17 345 3 EF_2899 Ferredoxin--NADP reductase Enterococcus faecalis (strain ATCC 700802 / V583)
Q13Y97 0.000163 47 30 7 161 3 Bxeno_A2404 Ferredoxin--NADP reductase Paraburkholderia xenovorans (strain LB400)
Q04799 0.000179 47 45 0 44 1 FMO5 Flavin-containing monooxygenase 5 Oryctolagus cuniculus
A9VRK8 0.000189 47 24 12 271 3 BcerKBAB4_0332 Ferredoxin--NADP reductase 1 Bacillus mycoides (strain KBAB4)
P52213 0.000193 47 26 14 330 3 trxB Thioredoxin reductase Peptoclostridium litorale
Q3AS18 0.000213 47 29 8 164 3 Cag_0944 Ferredoxin--NADP reductase Chlorobium chlorochromatii (strain CaD3)
B3QPZ8 0.000256 47 25 10 213 3 Cpar_1603 Ferredoxin--NADP reductase Chlorobaculum parvum (strain DSM 263 / NCIMB 8327)
A4SVT8 0.000286 46 25 16 313 3 Pnuc_0382 Ferredoxin--NADP reductase Polynucleobacter asymbioticus (strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1)
P50971 0.000298 46 26 16 336 1 trxB Thioredoxin reductase Peptoclostridium acidaminophilum
A4YER6 0.000312 46 24 16 329 3 Msed_0743 Ferredoxin--NADP reductase Metallosphaera sedula (strain ATCC 51363 / DSM 5348 / JCM 9185 / NBRC 15509 / TH2)
Q48303 0.000328 47 25 5 174 3 dmd Dimethylamine dehydrogenase Hyphomicrobium sp. (strain x)
P0A0E4 0.000356 46 31 4 101 3 merA Mercuric reductase Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
P0A0E5 0.000356 46 31 4 101 3 merA Mercuric reductase Staphylococcus aureus
Q5KVP7 0.00049 45 25 16 320 3 GK2954 Ferredoxin--NADP reductase Geobacillus kaustophilus (strain HTA426)
Q9SXE1 0.000493 46 43 0 48 1 FMOGS-OX3 Flavin-containing monooxygenase FMO GS-OX3 Arabidopsis thaliana
Q9SS04 0.000644 45 44 0 49 1 FMOGS-OX1 Flavin-containing monooxygenase FMO GS-OX1 Arabidopsis thaliana
Q3B2Q8 0.000659 45 32 4 121 3 Plut_1516 Ferredoxin--NADP reductase Chlorobium luteolum (strain DSM 273 / BCRC 81028 / 2530)
Q39243 0.00071 45 25 16 318 1 NTR1 Thioredoxin reductase 1, mitochondrial Arabidopsis thaliana
P97872 0.000737 45 40 0 44 1 Fmo5 Flavin-containing monooxygenase 5 Mus musculus
A6H064 0.000839 45 26 8 201 3 FP1670 Ferredoxin--NADP reductase Flavobacterium psychrophilum (strain ATCC 49511 / DSM 21280 / CIP 103535 / JIP02/86)
P16171 0.000852 45 29 3 105 1 merA Mercuric reductase Bacillus cereus

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS18290
Feature type CDS
Gene -
Product FAD-dependent oxidoreductase
Location 4012039 - 4013436 (strand: -1)
Length 1398 (nucleotides) / 465 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_63
Orthogroup size 13
N. genomes 7

Actions

Genomic region

Domains

PF07992 Pyridine nucleotide-disulphide oxidoreductase
PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0493 Amino acid transport and metabolism (E)
General function prediction only (R)		 ER NADPH-dependent glutamate synthase beta chain or related oxidoreductase

Kegg Ortholog Annotation(s)

Protein Sequence

MGQNVYQFIDLNRVEPTKKPLAVRKIEFVEIYEAFSAEQASAQADRCLDCGNPYCEWKCPVHNYIPNWLKLANEGRIIEAAELSHQTNSLPEICGRVCPQDRLCEGACTLNDEFGAVTIGNIERYINDTAFALGWRPSLSQVTMTDKKVAIIGAGPAGLACADVLIRQGVKPVVYDKHPEIGGLLTFGIPSFKLEKSLMVRRRELFSEMGITFCLNTEIGKDISLKTLIEQYDAVFLGLGTYQSLSGHFAHENAMGVYNALPYLIGNTRHLMGYAEDPQSPYIDLNKKHVVVLGGGDTAMDCVRTAIRQGATKVTCVYRRDENNMPGSKREVKNAKEEGGEFLFNRQPLDIEVDANNNVIGVRVIKTQTNGELKYIEGSEHILSADAVILAFGFKPAHYPWLDENNIQYASSGRIIINDDPLLPLQTTNPKVFAGGDIVRGSDLVVTAIAQGREAAEGILRYLSC

Flanking regions ( +/- flanking 50bp)

TCGCCGTTCAGTCGCTGAATTACGCGTTCAGGCACAATAGGAGAAAAATGATGGGTCAGAATGTGTATCAATTTATCGACTTAAATCGCGTTGAACCGACTAAAAAGCCGTTAGCTGTGCGTAAAATTGAGTTTGTCGAGATTTATGAGGCATTTTCTGCTGAGCAAGCCTCTGCACAAGCCGATCGCTGTTTAGACTGTGGTAATCCTTATTGTGAATGGAAATGCCCAGTGCATAACTATATCCCTAATTGGCTAAAATTAGCCAATGAAGGACGAATAATAGAAGCAGCAGAGCTTTCTCATCAAACCAATAGCTTACCGGAAATCTGTGGTCGTGTTTGTCCACAAGACCGATTATGCGAAGGCGCTTGTACGTTAAATGATGAATTTGGTGCGGTCACTATTGGTAATATAGAACGCTATATCAATGATACCGCCTTTGCGCTGGGCTGGCGCCCTTCCCTGTCTCAAGTCACCATGACAGATAAAAAAGTCGCCATTATTGGTGCAGGCCCTGCGGGATTGGCTTGTGCTGATGTGCTGATCCGCCAAGGAGTAAAACCCGTAGTCTATGATAAACACCCTGAAATCGGTGGATTACTCACTTTCGGTATTCCCTCTTTTAAACTTGAAAAATCGCTGATGGTAAGACGACGCGAGTTATTTAGCGAAATGGGAATAACCTTTTGTCTTAATACAGAAATAGGCAAAGATATCTCACTAAAAACACTGATAGAGCAATATGATGCTGTTTTCCTTGGCTTGGGTACTTATCAAAGTTTGAGTGGTCATTTTGCCCATGAGAACGCAATGGGGGTTTATAATGCCTTACCTTATTTAATTGGTAATACTCGCCATTTAATGGGTTATGCAGAAGATCCCCAATCACCTTATATCGACCTCAATAAAAAGCACGTGGTGGTGTTAGGGGGTGGGGATACGGCGATGGATTGTGTACGAACCGCTATTCGCCAAGGTGCCACTAAAGTAACTTGTGTTTATCGTCGCGATGAAAATAATATGCCCGGCTCTAAACGTGAAGTAAAAAATGCCAAAGAAGAAGGTGGCGAATTTTTATTTAATCGCCAACCCCTTGATATTGAAGTAGATGCTAATAATAACGTCATCGGTGTTCGTGTAATAAAAACACAAACCAACGGGGAATTAAAATATATAGAAGGCAGCGAACATATATTATCCGCAGATGCGGTTATTCTTGCATTTGGTTTTAAACCTGCACACTATCCGTGGTTAGATGAAAATAATATTCAATACGCATCATCGGGTAGAATTATTATTAATGATGATCCACTATTACCTTTGCAAACGACCAATCCTAAGGTGTTTGCTGGAGGTGATATTGTAAGAGGCTCCGATCTGGTGGTCACCGCGATAGCACAAGGAAGAGAAGCAGCGGAAGGGATCTTGCGTTATTTATCTTGTTAAAGATAGCAATATTCAATATTACTTATCTTTAATACTAAAATAGTAACAAT