COG0493


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0493, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 19 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description NADPH-dependent glutamate synthase beta chain or related oxidoreductase
Function(s) descr. Amino acid transport and metabolism (E)
General function prediction only (R)

Occurence in the database

COG0493 is associated with 19 different proteins (see tab "Protein list" and "Profile")
The 19 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_63 FBDBKF_03110 24805 26223 1 gltD NADPH-dependent glutamate synthase beta chain or related oxidoreductase Morganella morganii S1
1 group_63 FBDBKF_04805 165638 167602 -1 hycB Fe-S-cluster-containing hydrogenase component 2 Morganella morganii S1
2 group_2756 FBDBKF_07690 53357 56467 -1 ygfK putative selenate reductase subunit YgfK Morganella morganii S1
3 group_63 EHELCC_06095 225095 227059 -1 hycB Fe-S-cluster-containing hydrogenase component 2 Morganella morganii S2
4 group_63 EHELCC_07425 220880 222298 -1 gltD NADPH-dependent glutamate synthase beta chain or related oxidoreductase Morganella morganii S2
5 group_2756 EHELCC_13520 27551 30661 -1 ygfK putative selenate reductase subunit YgfK Morganella morganii S2
6 group_63 NLDBIP_06415 266160 268124 -1 hycB Fe-S-cluster-containing hydrogenase component 2 Morganella morganii S4
7 group_63 NLDBIP_07750 220753 222171 -1 gltD NADPH-dependent glutamate synthase beta chain or related oxidoreductase Morganella morganii S4
8 group_2756 NLDBIP_13965 48426 51536 -1 ygfK putative selenate reductase subunit YgfK Morganella morganii S4
9 group_63 LHKJJB_03295 243684 245648 -1 hycB Fe-S-cluster-containing hydrogenase component 2 Morganella morganii S3
10 group_63 LHKJJB_07285 184499 185917 -1 gltD NADPH-dependent glutamate synthase beta chain or related oxidoreductase Morganella morganii S3
11 group_2756 LHKJJB_08885 108213 111323 1 ygfK putative selenate reductase subunit YgfK Morganella morganii S3
12 group_63 HKOGLL_03645 47470 48888 1 gltD NADPH-dependent glutamate synthase beta chain or related oxidoreductase Morganella morganii S5
13 group_63 HKOGLL_06770 165548 167512 -1 hycB Fe-S-cluster-containing hydrogenase component 2 Morganella morganii S5
14 group_2756 HKOGLL_08435 108213 111323 1 ygfK putative selenate reductase subunit YgfK Morganella morganii S5
15 group_63 F4V73_RS09275 1945279 1947243 -1 FAD-dependent oxidoreductase Morganella psychrotolerans
16 group_63 F4V73_RS11815 512900 514318 -1 FAD-dependent oxidoreductase Morganella psychrotolerans
17 group_2756 F4V73_RS13410 312102 315212 1 ygfK putative selenate reductase subunit YgfK Morganella psychrotolerans
18 group_63 PMI_RS18290 4012039 4013436 -1 FAD-dependent oxidoreductase Proteus mirabilis HI4320