Homologs in group_1736

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12115 FBDBKF_12115 78.9 Morganella morganii S1 hemN oxygen-independent coproporphyrinogen III oxidase
EHELCC_14190 EHELCC_14190 78.9 Morganella morganii S2 hemN oxygen-independent coproporphyrinogen III oxidase
NLDBIP_15285 NLDBIP_15285 78.9 Morganella morganii S4 hemN oxygen-independent coproporphyrinogen III oxidase
LHKJJB_15325 LHKJJB_15325 78.9 Morganella morganii S3 hemN oxygen-independent coproporphyrinogen III oxidase
HKOGLL_14445 HKOGLL_14445 78.9 Morganella morganii S5 hemN oxygen-independent coproporphyrinogen III oxidase
F4V73_RS14525 F4V73_RS14525 78.9 Morganella psychrotolerans hemN oxygen-independent coproporphyrinogen III oxidase

Distribution of the homologs in the orthogroup group_1736

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1736

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A1E1 0.0 721 73 0 457 3 hemN Oxygen-independent coproporphyrinogen III oxidase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1E2 0.0 721 73 0 457 3 None Oxygen-independent coproporphyrinogen III oxidase Salmonella typhi
P32131 0.0 717 72 0 457 1 hemN Oxygen-independent coproporphyrinogen III oxidase Escherichia coli (strain K12)
P74132 3.66e-164 474 51 3 460 1 hemN Oxygen-independent coproporphyrinogen III oxidase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P77915 1.84e-156 454 50 4 458 2 hemN Oxygen-independent coproporphyrinogen III oxidase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
O67886 1.3e-144 424 47 3 453 3 hemN Oxygen-independent coproporphyrinogen III oxidase Aquifex aeolicus (strain VF5)
O34162 1.07e-143 422 48 3 440 2 hemN Oxygen-independent coproporphyrinogen III oxidase Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
O25376 9.41e-121 363 42 6 461 3 hemN Oxygen-independent coproporphyrinogen III oxidase Helicobacter pylori (strain ATCC 700392 / 26695)
Q9ZLH0 4.02e-120 361 42 8 462 3 hemN Oxygen-independent coproporphyrinogen III oxidase Helicobacter pylori (strain J99 / ATCC 700824)
O31067 5.2e-98 300 48 2 325 3 hemN Oxygen-independent coproporphyrinogen III oxidase (Fragment) Thermostichus vulcanus
O31381 2.41e-95 297 36 3 426 3 hemN Oxygen-independent coproporphyrinogen III oxidase Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)
P95651 5.9e-91 286 37 7 443 3 hemN Oxygen-independent coproporphyrinogen III oxidase Cereibacter sphaeroides (strain ATCC 17025 / ATH 2.4.3)
Q51676 5.95e-89 281 34 4 427 3 hemN Oxygen-independent coproporphyrinogen III oxidase Paracoccus denitrificans (strain Pd 1222)
P33770 3.25e-87 276 35 7 444 3 hemN Coproporphyrinogen III oxidase, anaerobic 1 Cereibacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / CCUG 31486 / LMG 2827 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.)
P51008 8.5e-83 265 34 3 425 3 hemZ Oxygen-independent coproporphyrinogen III oxidase Cereibacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / CCUG 31486 / LMG 2827 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.)
P95506 9.28e-71 223 68 1 148 3 hemN Oxygen-independent coproporphyrinogen III oxidase (Fragment) Mannheimia haemolytica
P54304 1.24e-35 139 25 6 389 2 hemW Heme chaperone HemW Bacillus subtilis (strain 168)
P52062 7.56e-32 128 31 2 243 1 hemW Heme chaperone HemW Escherichia coli (strain K12)
Q9CGF7 3.96e-31 126 29 3 248 1 hemW Heme chaperone HemW Lactococcus lactis subsp. lactis (strain IL1403)
P43899 1.59e-30 124 31 2 245 3 hemW Heme chaperone HemW Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P55477 5.79e-29 117 33 0 183 4 NGR_a03400 Uncharacterized protein y4hJ Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q8K928 9.11e-27 114 26 4 277 3 hemW Heme chaperone HemW Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P57615 2.92e-26 112 26 2 241 3 hemW Heme chaperone HemW Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
A0A384LP51 1.63e-23 105 24 8 326 1 chuW Anaerobilin synthase Escherichia coli O157:H7
P73245 4.96e-22 101 25 7 308 1 hemW Heme chaperone HemW Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q5SUV1 7.52e-20 95 26 4 243 2 Rsad1 Radical S-adenosyl methionine domain-containing protein 1, mitochondrial Mus musculus
A4IGH2 3.91e-19 92 25 2 199 2 rsad1 Radical S-adenosyl methionine domain-containing protein 1, mitochondrial Danio rerio
P9WP73 1.82e-18 90 22 3 252 1 hemW Heme chaperone HemW Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WP72 1.82e-18 90 22 3 252 3 hemW Heme chaperone HemW Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
A5D7B1 2.69e-18 90 25 5 244 2 RSAD1 Radical S-adenosyl methionine domain-containing protein 1, mitochondrial Bos taurus
Q9HA92 7.72e-18 89 24 5 250 1 RSAD1 Radical S-adenosyl methionine domain-containing protein 1, mitochondrial Homo sapiens
Q796V8 4.66e-12 71 26 4 192 2 hemZ Oxygen-independent coproporphyrinogen-III oxidase-like protein HemZ Bacillus subtilis (strain 168)
Q54VE8 2.99e-10 65 24 4 177 3 rsad1 Radical S-adenosyl methionine domain-containing protein 1, mitochondrial Dictyostelium discoideum
Q89A47 9.81e-10 63 25 0 186 3 hemW Putative heme chaperone HemW-like protein Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
A0Q0P6 1.68e-06 53 25 11 287 3 rimO Ribosomal protein uS12 methylthiotransferase RimO Clostridium novyi (strain NT)
B4S8Z6 5.75e-05 48 26 11 226 3 rimO Ribosomal protein uS12 methylthiotransferase RimO Prosthecochloris aestuarii (strain DSM 271 / SK 413)
A0M7D3 0.000222 47 24 11 249 3 miaB tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase Christiangramia forsetii (strain DSM 17595 / CGMCC 1.15422 / KT0803)
B3EPX5 0.000448 46 26 10 223 3 rimO Ribosomal protein uS12 methylthiotransferase RimO Chlorobium phaeobacteroides (strain BS1)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS14260
Feature type CDS
Gene hemN
Product oxygen-independent coproporphyrinogen III oxidase
Location 3164458 - 3165831 (strand: -1)
Length 1374 (nucleotides) / 457 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1736
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04055 Radical SAM superfamily
PF06969 HemN C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0635 Coenzyme transport and metabolism (H) H Coproporphyrinogen-III oxidase HemN (oxygen-independent) or related Fe-S oxidoreductase

Kegg Ortholog Annotation(s)

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG013205 oxygen-independent coproporphyrinogen III oxidase VF0758 Nutritional/Metabolic factor

Protein Sequence

MSEQTIIWDLDLIHKYNYSGPRYTSYPTALEFNQQYSDADFEQATKRYPERPLSLYIHIPFCHKLCYFCGCNKIITRHKHKADEYLDVLEKEIINRARYFKNRKVTQMHWGGGTPTFLDKQQISRLVALLRQHFHFVENAELSIEIDPREIELDVIDHLHNEGFNRLSMGVQDFNKEVQQKVNREQDEAFIFSLVARAREVGFHSTSIDLIYGLPKQTKESFAFTLKKVIELSPDRLSVFNYAHLPNLFAAQRKIKDEDLPLAEEKLEILQETITTLTTNGYQFIGMDHFAKPDDELAVAQRQGILHRNFQGYTTHEECDLLGMGVSAISMLGDHYAQNEKVLKEYYARVNSEGHALWRGLSLTHDDCIRRDVIKTLICNFHLNFTEIENLYQLDFQDYFKEDLALLAPMVEDGLVEISAEKIQVTPRGRLLIRNICMCFDTYLRNQMRQRQFSRVI

Flanking regions ( +/- flanking 50bp)

TCTGTTGGCTGGTATGGCACATCGGCGGTTCACTTTTGGAAGGTAGAAGCATGTCAGAACAAACAATTATTTGGGATCTTGACCTGATCCATAAGTATAACTATTCAGGTCCGCGCTACACATCATACCCAACGGCATTGGAATTTAATCAGCAATATAGTGATGCGGATTTCGAACAAGCAACAAAGCGTTATCCCGAACGACCTCTGTCACTGTATATTCACATTCCTTTCTGCCATAAGTTATGTTATTTCTGCGGTTGTAATAAAATTATCACGCGCCATAAACATAAAGCTGATGAATATCTTGATGTTTTAGAAAAAGAAATTATTAATCGCGCTCGCTATTTTAAAAATAGAAAAGTGACCCAAATGCATTGGGGGGGCGGTACTCCCACTTTTCTTGATAAACAGCAAATTAGTCGCTTAGTCGCTTTATTAAGACAACATTTTCATTTTGTGGAAAATGCTGAGCTCTCTATTGAAATTGATCCCCGTGAGATTGAGTTAGATGTTATTGATCATTTACACAATGAGGGATTTAACCGCCTAAGTATGGGGGTGCAAGATTTTAATAAAGAGGTACAACAAAAAGTTAATCGTGAACAAGATGAAGCATTTATCTTTTCATTAGTAGCAAGAGCGCGTGAAGTGGGCTTTCATTCTACCAGTATTGATTTGATCTATGGGCTACCTAAACAGACTAAAGAAAGTTTTGCTTTTACGTTAAAAAAAGTGATTGAATTGTCCCCTGATCGCTTAAGTGTGTTCAATTATGCCCATTTACCTAATTTATTTGCCGCACAACGTAAAATTAAAGATGAAGATTTACCACTTGCAGAAGAAAAGTTAGAGATCTTGCAAGAGACTATCACCACACTCACCACAAATGGTTATCAGTTTATTGGTATGGATCACTTTGCTAAGCCTGATGATGAATTAGCGGTTGCACAACGCCAAGGTATTTTACATCGTAATTTCCAAGGATATACCACTCATGAAGAGTGTGACTTATTGGGAATGGGCGTTTCAGCTATCAGTATGCTGGGTGATCACTATGCGCAGAACGAAAAAGTGCTAAAAGAGTATTATGCTCGCGTAAATAGCGAAGGGCATGCGTTGTGGCGTGGACTCTCTCTAACTCATGATGATTGTATTCGTCGCGATGTTATTAAGACCTTGATTTGTAATTTCCATCTTAACTTTACTGAGATTGAAAATCTATATCAGCTTGATTTCCAAGATTATTTTAAAGAAGACTTAGCATTGCTTGCACCAATGGTAGAAGATGGATTGGTGGAGATCAGCGCAGAAAAAATTCAGGTCACTCCAAGAGGACGTTTATTGATCCGTAATATTTGTATGTGTTTTGATACTTATTTACGTAATCAAATGCGCCAACGCCAATTCTCTCGAGTGATTTAGTGGGCAAAAATAAAAGGGAGGGGAGTGACTTAAAACTCCTCTATACCTAA