Orthogroup:group_1776


Homologs in group_1776

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_12955 FBDBKF_12955 Morganella morganii S1 ybbP putative ABC transporter permease subunit YbbP
EHELCC_06270 EHELCC_06270 Morganella morganii S2 ybbP putative ABC transporter permease subunit YbbP
NLDBIP_06590 NLDBIP_06590 Morganella morganii S4 ybbP putative ABC transporter permease subunit YbbP
LHKJJB_03470 LHKJJB_03470 Morganella morganii S3 ybbP putative ABC transporter permease subunit YbbP
HKOGLL_06945 HKOGLL_06945 Morganella morganii S5 ybbP putative ABC transporter permease subunit YbbP
F4V73_RS16140 F4V73_RS16140 Morganella psychrotolerans ybbP putative ABC transporter permease subunit YbbP
PMI_RS10670 PMI_RS10670 Proteus mirabilis HI4320 ybbP putative ABC transporter permease subunit YbbP

Distribution of group_1776 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1776 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1776

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1776.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ybbP 7

Product

# Product Occurence
1 putative ABC transporter permease subunit YbbP 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3127 7 Q Secondary metabolites biosynthesis, transport and catabolism (Q) Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02004 7 putative ABC transport system permease protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02687 7 FtsX-like permease family
PF12704 1 MacB-like periplasmic core domain

Annotations of the 2 SwissProt hits

Annotation Number of occurrences
Lipoprotein-releasing system transmembrane protein LolC 1
Uncharacterized ABC transporter permease YbbP 1

Protein length

Min length 810
Max length 813
Mean length (sd) 810.4 (1.1)
Median length 810.0

Protein length distribution