COG0635


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0635, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Coproporphyrinogen-III oxidase HemN (oxygen-independent) or related Fe-S oxidoreductase
Function(s) descr. Coenzyme transport and metabolism (H)

Occurence in the database

COG0635 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1736 FBDBKF_12115 78508 79878 -1 hemN oxygen-independent coproporphyrinogen III oxidase Morganella morganii S1
1 group_1996 FBDBKF_15025 16180 17310 -1 hemW radical SAM family heme chaperone HemW Morganella morganii S1
2 group_1996 EHELCC_11220 67596 68726 1 hemW radical SAM family heme chaperone HemW Morganella morganii S2
3 group_1736 EHELCC_14190 54827 56197 1 hemN oxygen-independent coproporphyrinogen III oxidase Morganella morganii S2
4 group_1996 NLDBIP_11565 67596 68726 1 hemW radical SAM family heme chaperone HemW Morganella morganii S4
5 group_1736 NLDBIP_15285 58764 60134 1 hemN oxygen-independent coproporphyrinogen III oxidase Morganella morganii S4
6 group_1996 LHKJJB_11425 67596 68726 1 hemW radical SAM family heme chaperone HemW Morganella morganii S3
7 group_1736 LHKJJB_15325 78508 79878 -1 hemN oxygen-independent coproporphyrinogen III oxidase Morganella morganii S3
8 group_1996 HKOGLL_10035 67596 68726 1 hemW radical SAM family heme chaperone HemW Morganella morganii S5
9 group_1736 HKOGLL_14445 65171 66541 -1 hemN oxygen-independent coproporphyrinogen III oxidase Morganella morganii S5
10 group_1996 F4V73_RS12425 68289 69419 1 hemW radical SAM family heme chaperone HemW Morganella psychrotolerans
11 group_1736 F4V73_RS14525 134270 135640 1 hemN oxygen-independent coproporphyrinogen III oxidase Morganella psychrotolerans
12 group_1996 PMI_RS01585 382997 384127 -1 hemW radical SAM family heme chaperone HemW Proteus mirabilis HI4320
13 group_1736 PMI_RS14260 3164458 3165831 -1 hemN oxygen-independent coproporphyrinogen III oxidase Proteus mirabilis HI4320