VFG013205


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Virulence factors VFG013205, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Virulence factors within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Virulence factor(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Virulence factors has been clustered.
In red the Virulence factors with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Virulence factors prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Virulence factors.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Virulence factors prediction.

Description

Protein oxygen-independent coproporphyrinogen III oxidase
VF ID VF0758
Category Nutritional/Metabolic factor
Protein ID WP_012341592
Vf_category_id VFC0272

Occurence in the database

VFG013205 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1736 FBDBKF_12115 78508 79878 -1 hemN oxygen-independent coproporphyrinogen III oxidase Morganella morganii S1
1 group_1736 EHELCC_14190 54827 56197 1 hemN oxygen-independent coproporphyrinogen III oxidase Morganella morganii S2
2 group_1736 NLDBIP_15285 58764 60134 1 hemN oxygen-independent coproporphyrinogen III oxidase Morganella morganii S4
3 group_1736 LHKJJB_15325 78508 79878 -1 hemN oxygen-independent coproporphyrinogen III oxidase Morganella morganii S3
4 group_1736 HKOGLL_14445 65171 66541 -1 hemN oxygen-independent coproporphyrinogen III oxidase Morganella morganii S5
5 group_1736 F4V73_RS14525 134270 135640 1 hemN oxygen-independent coproporphyrinogen III oxidase Morganella psychrotolerans
6 group_1736 PMI_RS14260 3164458 3165831 -1 hemN oxygen-independent coproporphyrinogen III oxidase Proteus mirabilis HI4320