Homologs in group_3694

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3 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS01445 PMI_RS01445 32.9 Proteus mirabilis HI4320 - fimbria/pilus periplasmic chaperone
PMI_RS09275 PMI_RS09275 27.7 Proteus mirabilis HI4320 - molecular chaperone
PMI_RS10940 PMI_RS10940 35.4 Proteus mirabilis HI4320 - fimbria/pilus periplasmic chaperone

Distribution of the homologs in the orthogroup group_3694

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3694

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P25402 5.57e-61 193 44 7 225 3 fanE Chaperone protein FanE Escherichia coli
P25401 5.58e-38 135 32 7 231 1 faeE Chaperone protein FaeE Escherichia coli
Q05433 2.93e-37 134 32 7 231 3 clpE Chaperone protein ClpE Escherichia coli
P62609 8.3e-33 121 35 9 223 1 focC Chaperone protein FocC Escherichia coli
P62610 8.3e-33 121 35 9 223 3 focC Chaperone protein FocC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P59590 1.15e-29 113 33 9 222 3 fimC Chaperone protein FimC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P21646 2.09e-29 112 32 9 241 3 mrkB Chaperone protein MrkB Klebsiella pneumoniae
P31697 6.02e-29 111 33 8 216 1 fimC Chaperone protein FimC Escherichia coli (strain K12)
P42914 1.21e-27 108 32 7 228 2 yraI Probable fimbrial chaperone YraI Escherichia coli (strain K12)
P37923 1.51e-25 102 32 9 227 3 fimC Chaperone protein FimC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P45991 2.66e-25 102 29 6 230 3 hifB Chaperone protein HifB Haemophilus influenzae
P43661 9.9e-25 100 30 8 224 3 lpfB Chaperone protein LpfB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P35757 1.51e-24 100 29 6 230 3 hifB Chaperone protein HifB Haemophilus influenzae
P15319 3.4e-24 99 31 6 211 1 papD Chaperone protein PapD Escherichia coli
Q8X5E4 5.19e-24 98 32 8 214 2 elfD Probable fimbrial chaperone protein ElfD Escherichia coli O157:H7
P75856 5.47e-24 98 32 7 214 2 elfD Probable fimbrial chaperone protein ElfD Escherichia coli (strain K12)
P33409 7.72e-24 98 30 8 230 3 fimB Chaperone protein FimB/FhaD Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
P77249 1.1e-21 92 30 8 224 2 sfmC Probable fimbrial chaperone SfmC Escherichia coli (strain K12)
Q8X5K6 2.7e-21 91 32 9 203 2 lpfB Probable fimbrial chaperone LpfB Escherichia coli O157:H7
P33128 3.73e-21 91 31 10 238 1 yadV Probable fimbrial chaperone YadV Escherichia coli (strain K12)
P77616 1.59e-19 87 31 12 227 3 yqiH Uncharacterized fimbrial chaperone YqiH Escherichia coli (strain K12)
P77599 1.72e-19 87 35 7 162 2 yfcS Probable fimbrial chaperone YfcS Escherichia coli (strain K12)
P53520 3.16e-19 86 29 7 179 3 pmfD Chaperone protein PmfD Proteus mirabilis (strain HI4320)
P75749 1.77e-17 81 29 10 227 3 ybgP Uncharacterized fimbrial chaperone YbgP Escherichia coli (strain K12)
P40876 1.95e-16 78 31 8 235 2 ycbF Uncharacterized fimbrial chaperone YcbF Escherichia coli (strain K12)
P33342 2.57e-16 78 27 6 220 2 yehC Probable fimbrial chaperone YehC Escherichia coli (strain K12)
P53519 1.36e-13 70 27 10 230 3 cssC Chaperone protein CssC Escherichia coli
P53518 4.35e-13 69 25 9 229 3 cssC Chaperone protein CssC Escherichia coli
P69966 2.47e-12 67 27 7 217 3 psaB Chaperone protein PsaB Yersinia pseudotuberculosis serotype I (strain IP32953)
P69965 2.47e-12 67 27 7 217 3 psaB Chaperone protein PsaB Yersinia pestis
P15483 7.72e-12 65 29 8 238 3 None Chaperone protein CS3-1 Escherichia coli
P33407 2.45e-10 62 26 10 248 3 myfB Chaperone protein MyfB Yersinia enterocolitica
P33387 7.56e-10 60 27 9 213 3 sefB Chaperone protein SefB Salmonella enteritidis
P53516 3.37e-09 58 27 7 172 3 afaB Chaperone protein AfaB Escherichia coli
P46004 1.69e-08 56 24 10 248 3 aggD Chaperone protein AggD Escherichia coli
P26926 4.6e-07 52 24 5 171 1 caf1M Chaperone protein caf1M Yersinia pestis
P46738 2.89e-06 50 26 7 172 3 nfaE Chaperone protein NfaE Escherichia coli

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS05170
Feature type CDS
Gene -
Product fimbrial chaperone
Location 1130658 - 1131326 (strand: 1)
Length 669 (nucleotides) / 222 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3694
Orthogroup size 4
N. genomes 1

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Genomic region

Domains

PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain
PF02753 Pili assembly chaperone PapD, C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3121 Extracellular structures (W) W P pilus assembly protein, chaperone PapD

Protein Sequence

MNRIVFVFALIISSLTCFKAYSAFTLNGTRFIYDEGRKNIAIEVKNNSDKTYGGQVWIDNLNGNEVFFIPAPNLFKITGGEKQLIRLLYVNDILPKDRESLFWLNIQEIPPISSADDSNVLAVALNTQVKLIYRPKILAEKREDAEKSLTYSGSVLKNPTPYYFALTQVSVNNNPLVLSKDIEQSISLFPPFSEVNVQRPLLGKVTVEAIDDYGARRVIELN

Flanking regions ( +/- flanking 50bp)

TTTGGAGAAAGTAGAATCTAATGATCATAAAATTATGGAAATTGAATGTAATGAATAGAATAGTATTTGTTTTTGCTTTAATCATATCGTCATTAACCTGTTTTAAAGCATATTCAGCGTTTACGCTTAATGGTACTCGCTTTATTTATGATGAAGGTCGCAAGAATATCGCGATAGAAGTTAAGAATAATAGTGATAAAACCTATGGTGGCCAAGTTTGGATTGATAATCTTAATGGGAATGAAGTGTTCTTTATTCCTGCACCTAATTTATTCAAAATAACTGGAGGAGAAAAACAATTAATCCGCTTGCTATATGTAAATGATATTTTACCTAAAGATAGGGAATCATTGTTTTGGCTCAATATTCAGGAAATCCCGCCAATTTCTTCTGCCGATGACAGTAATGTGCTTGCTGTTGCATTAAACACACAAGTTAAACTGATTTATCGCCCTAAGATTTTAGCTGAAAAACGCGAGGATGCAGAAAAAAGTCTGACATATAGTGGTTCAGTTTTAAAGAATCCTACACCTTACTATTTTGCATTAACTCAAGTGTCAGTCAATAATAATCCTTTGGTCTTGTCAAAAGACATTGAGCAATCTATTAGTTTATTTCCACCTTTCAGTGAGGTAAATGTGCAGCGCCCATTGTTAGGTAAAGTAACCGTTGAAGCTATTGATGATTATGGTGCTAGACGTGTTATTGAGCTTAATTAAGGAAGTAAAAATGAAAAATAAATCATTTTATTTCACGCTATTATTATTTT